| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1581 |
|---|
| Symbol | |
|---|
| ID | 8753251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 1640571 |
|---|
| End bp | 1643156 |
|---|
| Gene Length | 2586 bp |
|---|
| Protein Length | 861 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | aminoacyl-tRNA synthetase class Ia |
|---|
| Protein accession | YP_003408671 |
|---|
| Protein GI | 284990117 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACCG ACACCCGCAC CCCGGACACC GCTGCGCCGG GAGCCTCGGT CGGCGTACCG
GAGAAGCCGT CGCTCGACGG GCTCGAGGAC AAGTGGACCG GCCGCTGGGC CGAGGACGAC
ACCTACGCCT TCGACCGCGC GGCCGCTCTC GCGGCGCCCC GGGAGCAGAC CTGGTCGATC
GACACCCCGC CGCCGACGGC CAGCGGCTCG CTGCACGTCG GGCACGTGTT CAGCTACACG
CACACCGACA TCGTCGCCCG CTACCAGCGG ATGCGCGGCA AGCACGTCTA CTACCCGATG
GGCTGGGACG ACAACGGCCT GCCCACCGAG CGCCGCGTGC AGAACTACTA CGGCGTGCGC
TGCGACCCCT CGCTCCCCTA CGACGAGGGC TTCGAGCCAC CGGCCAAGCC GGGCAAGGAC
CAGCAGCCGG TCTCCCGGCG CAACTTCGTC GAGCTGTGCA TGCGGCTGAC CGAGGAGGAC
GAGCGGGCCT TCGAGCAGCT GTGGCGCCGT GTCGGGCTGT CGGTGGACTG GAACAACGTC
TACCGGACGA TCTCGGAGGC CTCCCGCGCC ACCGCACAGC GTGCGTTCCT GCACAACCTC
GCCCGCGGCG AGGCCTACGC GCAGGAGGCG CCGACCCTCT GGGACGTCTC CTTCCGGACG
GCGGTCGCCC AGGCTGAGCT CGAGGACCGC GAGCGCCCCG GCGCCTACCA CCGGATCTCC
TTCCACACCG CCAACGGCCC GGTGTTCATC GAGACGACCC GGCCCGAGCT GCTGCCCGCC
TGCGTCGCGC TGGTCGCCCA CCCCGACGAC GAGCGCTATC AGCCGCTGTT CGGCCAGACC
GTGCGGACGC CGGTCTTCGA CGTCGAGGTG CCCGTGGTGG CGCACCGCCT CGCGGAGCCG
GACAAGGGCT CGGGCATCGC GATGATCTGC ACCTTCGGCG ACCTCAACGA CGTCACCTGG
TGGCGGGAGC TGCAGCTGCC GACCCGCGCG ATCGTCGGCT GGGACGGCCG GCTGCTGCCC
GAGGCGCCGC CCGGGGTGCC CGCCGAGACG TACGCCGAGC TGGCCGGCAA GACGGTGTTC
AGCGCGCAGC AGCGGATGGT CGAGCTGCTG CAGGAGTCCG GTGACCTGGA CGGCGAGCCG
CGGGCGATCA CCCACCCGGT GAAGTTCTAC GAGAAGGGCG AGCGCCCGCT GGAGATCGTC
ACCACGCGGC AGTGGTACAT CCGCAACGGG GGCCGGGACG CCGCCCTGCG CGACGCGCTG
GTCGCGCGTG GCCGGGAGAT CCGGTGGGTG CCCGAGCACA TGCGGTACCG GTACGAGAAC
TGGGTCGAGG GCCTCAACGG CGACTGGCTG ATCAGCCGGC AGCGGTTCTT CGGCGTCCCG
TTCCCGGTCT GGTACCGGCT CGACTCCTCC GGTGACCCGG ACTGGTCCTC GCCGATCCTC
GCGCCCGAGG AGGCGCTGCC GGTCGACCCG TCGTCCGACG TCCCGCCTGG CTTCTCCGAG
GACCAGCGCG GCGAGCCCGG CGGCTTCACC GCCGACCCCG ACGTCATGGA CACCTGGGCG
ACGTCGTCGC TGTCGCCGCA GGTCGCGTCG GGCTGGGACA CCGACCCGGA GCTGTTCGCG
CACGTCTTCC CGATGGACCA GCGCCCGCAG GCCCACGACA TCATCCGGAC CTGGCTGTTC
TCCACCGTCG TCCGCTCGCA CTTCGAGCAC GGGACCGTGC CGTGGACGCA CGCGACGATC
TCCGGCTTCG TCGTCGACCC GGACCGCAAG AAGATGTCAA AGTCGAAGGG CAACGTCGTC
ACGCCGATCG ACGTGCTCGA GCGCTACGGC ACCGACGCGG TGCGCTGGCG GGCCGCCGGC
GCCCGGCCGG GGGCGGACTC GCCGTTCGAC GAGGCGCAGA TGAAGGTCGG CCGCCGGCTC
GCCATCAAGA TCCTCAACGT CGGCAAGTTC GTGCTGGGTC TGGGGGCGTC GGCCGACCTG
TCGGCCTCGG CTGTGACCGA GCCGGTCGAC CGGGGTCTGC TGGCCGGGCT GGCGGGTGTC
GTCGACGAGG CGACCGCGGC GATGGAGACC TACAACTACA CCCGGGCGCT CGAGCTGTCC
GAGGCGTTCT TCTGGTCGTT CTGCGACGAC TACGTGGAGC TGGTGAAGTC CCGCGCCTAC
GGGTCGGGGC CGGCCGCCGA GTCCGCCCGG GCCACCCTCG CGCTGGCGCT GTCGGTGCAG
CTGCGGCTGT TCGCGCCGGT GCTGCCGTTC GTCACCGAGG AGGTCTGGTC CTGGTGGCAG
TCCGGCTCGG TGCACCGCGC GCCGTGGCCG ACCGCGAGCG AGCTGCCGGA CGGCGGGGAC
CCGGCGGTGG TCTCGGTGGT GACGGTCGCG CTGGCCGGGG TCCGCAAGGC CAAGTCCGAC
GCCAAGGTCT CCATGCGGGC CGACGTCGAC TCCGCGACGG TGACCGCGCC GGCCGAGCAG
GTGCCGCTGG TGGAGGCCGC GCGCAGCGAC CTGGCCGAGG CCGGCCGGAT CGCCTCGCTG
ACCGTCGTCG CCGGTGAGGG CCCGCTCGCC GTGGACGTCG TCCTCGCTCC ACCCGCGGAG
GCCTGA
|
|---|
| Protein sequence | MVTDTRTPDT AAPGASVGVP EKPSLDGLED KWTGRWAEDD TYAFDRAAAL AAPREQTWSI
DTPPPTASGS LHVGHVFSYT HTDIVARYQR MRGKHVYYPM GWDDNGLPTE RRVQNYYGVR
CDPSLPYDEG FEPPAKPGKD QQPVSRRNFV ELCMRLTEED ERAFEQLWRR VGLSVDWNNV
YRTISEASRA TAQRAFLHNL ARGEAYAQEA PTLWDVSFRT AVAQAELEDR ERPGAYHRIS
FHTANGPVFI ETTRPELLPA CVALVAHPDD ERYQPLFGQT VRTPVFDVEV PVVAHRLAEP
DKGSGIAMIC TFGDLNDVTW WRELQLPTRA IVGWDGRLLP EAPPGVPAET YAELAGKTVF
SAQQRMVELL QESGDLDGEP RAITHPVKFY EKGERPLEIV TTRQWYIRNG GRDAALRDAL
VARGREIRWV PEHMRYRYEN WVEGLNGDWL ISRQRFFGVP FPVWYRLDSS GDPDWSSPIL
APEEALPVDP SSDVPPGFSE DQRGEPGGFT ADPDVMDTWA TSSLSPQVAS GWDTDPELFA
HVFPMDQRPQ AHDIIRTWLF STVVRSHFEH GTVPWTHATI SGFVVDPDRK KMSKSKGNVV
TPIDVLERYG TDAVRWRAAG ARPGADSPFD EAQMKVGRRL AIKILNVGKF VLGLGASADL
SASAVTEPVD RGLLAGLAGV VDEATAAMET YNYTRALELS EAFFWSFCDD YVELVKSRAY
GSGPAAESAR ATLALALSVQ LRLFAPVLPF VTEEVWSWWQ SGSVHRAPWP TASELPDGGD
PAVVSVVTVA LAGVRKAKSD AKVSMRADVD SATVTAPAEQ VPLVEAARSD LAEAGRIASL
TVVAGEGPLA VDVVLAPPAE A
|
|---|
| |