Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1231 |
Symbol | |
ID | 8752893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 1291110 |
End bp | 1292951 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_003408348 |
Protein GI | 284989794 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCCG TCGACGTGGG CACCGTATCG ACCGAGACCG ACGAGGACCG CTCGGATCTG GCAGGAGTGC GCGTGGGACG AGGACCTGGA GAGCACGACC TGCCGCTGGA CGTGCGTCGC CGGGTCGACG GTCCGGCGCA GCCCGCCGTC GTGGTCGAGG CCGTGCTCGA CGCGCTGCCC TCGCCCACCC TCCTGATCGA CGCCGGCGGC ACGGTGCTGC TGGCCAACAC CGCCTGGGAG AGGGCCGCCG ACGTCCTCGG TGACGACCGG GTGCGCTTCG GGGTGGACGG CGACTACTTC GCCATGGCCC GCCGGCTCAA CGGCGACGAC AACACCTCCA CGCTGGTCGA CCAGCTGCGC GAGCTCTCCC GCGGCGAGCG CTCCTCGGTG CAGGCCGACT ACGCCCTGGA GCTGCCCACC GGCATCCGCT GGATCCACCT GCAGGCCTCC CGGGTCGACC AGGCCGGCCA GGTCGTGGTC ACCCACACCG ACGTCACCTC CCGGGTGGCC GCCGAGCGCG CCTCGGACTG GCGGGCCCGC CACGACACCC TCACCGAGCT GCCCAACCGC GCCCACCTGC ACGAGCTCAT CGACACCGAG CTGCAGCGGC AGGACCGCGG GCCGGTGTCG GTGCTCTTCC TCGACATCGA CGGCTTCAAG GACGTCAACG ACTCCCTCGG CCACGACGTC GGCGACGACC TGCTGCGGCA GGTGGCCGCG CGGCTCACCG GCTCCACCCG AGCCGGCGAC ACCGTCGGCC GGCTCGGCGG CGACGAGTTC GTCGTCCTCT GCCGCGACTG CGACACCACC GGTGCCGAGG CCCTCGCCGA CCGCTGCCGC GCCGGCATCG ACCGCCCCTT CGAGCTCGGC GGCCGGCTGG TGCGCCTGGG GGCCAGCATC GGGATCGCCA CCGCCGCCGC GTCCGGCCCC ACCCGCGTGC GCTCCACCGA CCTGGTCCGT GACGCCGACC TCGCCATGTA CGCGGCCAAG GCGGCCGGCC GCAACCGCGT CCGGCTGTTC ACCGCCGACC TGCGTGCCGC CGCCCAGCAC AGGGCCACCG TCGCCTCCGA GCTGCGCGAC GCGGTGGAGG ACGGCCAGCT GGTGCTGCAC TACCAGCCGG TGGTGCACCT GCCCACGGGG CGGTGCACCG GCGTCGAGGC GCTCGTCCGC TGGCAGCACC CCCGCCGCGG CCTGCTCGCA CCGGCCGACT TCCTGCCGAT CGCCGTCCAG CACGACCTCA TGGGGGTGAT CGCCCGCTGG GTGCTGCACA CCGCGACCCG GCAGACCGCG GCGTGGGCGG CGGCCGGCCT GAACCTGGTG ACCGCGGTGA ACATCAGCGC CAACCACGTC GCCGCCGGCA CGCTCGTCGC CGACGTCCAG GAGGCGCTGA CCGACTCCGG CCTGCCGCCC GAGCAGCTCG TCGTCGAGAT GGCCGAGCGG TCGGTCGCCG AGGACGTCGA GCGCGCTGCC GCGCAGTTCG CCGAGCTGCG CCGGTCCGGC GTGGAGGTCT CGATCGACGA CTTCGGCGGC GGCTTCTCCT CGCTGGGCCA GCTGGTCGCC ATGCCCACCG GCCTGCTCAA GATCGACCGC AGCCTGGTCG CCTACCCCGA GGGGCGGCGC AGTCAGGCGG CCGCGGCGAT CGCCGCCGTG GTGGCGCTGG CCGGGGCCTG TGGCGTGCGC ACCCACGCCG GGGGCGTGGA GACCGCGGAG CAGCTGGAGC TCGCCACCGA GCTGGGCTGC ACCTTCGCGC AGGGCTTCCA CCTCGCCCGG CCGATGCCCG CCGAGGACCT GACCGGCTGG CTCGCCGGGT ACGCCGGCCA GCCGGCCACC GCCCTCTTCT GA
|
Protein sequence | MSAVDVGTVS TETDEDRSDL AGVRVGRGPG EHDLPLDVRR RVDGPAQPAV VVEAVLDALP SPTLLIDAGG TVLLANTAWE RAADVLGDDR VRFGVDGDYF AMARRLNGDD NTSTLVDQLR ELSRGERSSV QADYALELPT GIRWIHLQAS RVDQAGQVVV THTDVTSRVA AERASDWRAR HDTLTELPNR AHLHELIDTE LQRQDRGPVS VLFLDIDGFK DVNDSLGHDV GDDLLRQVAA RLTGSTRAGD TVGRLGGDEF VVLCRDCDTT GAEALADRCR AGIDRPFELG GRLVRLGASI GIATAAASGP TRVRSTDLVR DADLAMYAAK AAGRNRVRLF TADLRAAAQH RATVASELRD AVEDGQLVLH YQPVVHLPTG RCTGVEALVR WQHPRRGLLA PADFLPIAVQ HDLMGVIARW VLHTATRQTA AWAAAGLNLV TAVNISANHV AAGTLVADVQ EALTDSGLPP EQLVVEMAER SVAEDVERAA AQFAELRRSG VEVSIDDFGG GFSSLGQLVA MPTGLLKIDR SLVAYPEGRR SQAAAAIAAV VALAGACGVR THAGGVETAE QLELATELGC TFAQGFHLAR PMPAEDLTGW LAGYAGQPAT ALF
|
| |