| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0360 |
|---|
| Symbol | |
|---|
| ID | 8752010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 388911 |
|---|
| End bp | 390641 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_003407525 |
|---|
| Protein GI | 284988971 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTCTG CGCCCCCGAG TGATGACTCG GGGACCCGTC CTCGGCCGCC GTCAGTCGTC
GGGCGCGGCG CGCCCGTGAC CGCGGAGCCA TCCCCTTCGC TCCAGCTGCA TTCCTGGCGG
AGGCTGGACT GGCGCTTCCT GCTGCCCGCG CTGGGGGACG GTCCGGTCGT CCTCGCCGGC
CGCCCGGACG AGGAGCTGCG GGCGGCGCTG CCGCTGCTCG GTCTGCCCGT CCACCGTGTG
ACGTCGGACC AGGACTGGGA GGCCGTGGGA GGAACCGCGA GTCTGGTGGT CCTCATCGAC
CCGACCCCGA AGGACCTGGG TAGCGCAACA GGGGCGTGCC GCCCCGGTGC CTCGGTGTAC
GCCGAGGTGC GCCGATCCCT GTGCCGGCTG CAGGGACCGT GGACGCTGAT GGGCTGGCGG
CGCGCCTTCG CGGCCGCTGG ACTGGAGGAG GTGAGCGCGC ACTGGCATGC CCGCACCATC
GACAGGTCGG CCAGGATCAT CCCGGTCGAG GCCCGCGGTG CGATGCGTCA TGCCCTCGCT
CAGCACCAGG GCAGCTGGTT GCGGCGCATC CTGGCTGCGA CGGCTCGCGC CGCCGTAGGC
GTGGGGTTGC TCCCCGCGCT CATCCCCGAG GGCAGCGTCG TCGGCCGTTA CCCGGAGGTG
GCCGAGGGAG CAGGTAAGAA CCTCGTCGAG CGGGTCCTCG CCGAGAACGT CGACCGGCTG
GGCTTGAGCG CCGTCGGGCT GGGGGCAGCG CTGGAGACGG CGTTCCTGAC ACCGCGTTTC
GTGACTTCGC GCCACGTGGT GGTGCTGGTG TATGCCAAGG GAGAGAGCCG GCCTCGACTG
GTGGTCAAGG TGCCGCGCCA GCCCGACGAC AGCCGGGGCG TCCGCCGCGA GGCCGACATG
ATGCGGCGTC TCGCCGCTCT CCTCGGCCCC GACCGGTTGC GCGTTCCCGC GGTCCTCGGA
ACCGTGGCAT GCGACGGGCT GAGCCTGCTG GTCGAGTCAG CGATCCGAGG CGCCGTCCTG
ACCCCTCCAC AGGCCCACCG CCACTTCCGG ACCGTTCTCG CAGCAGGCAC CTCGTTCATC
GGCGCGCTCC CTGTCGTCCG TCCCGCAGGG GAGAACGCCG ACTGGTACGG CCCGGCCGTC
GAGCGGCCCC TGGCGCGGCT GGCCGAGATC GCACCACTGG CTGGGGAGAC CGCCGCGCTC
TGCGCCCGCA CGCACGAGCT GCTGGCGCCA CTCCGGTCGG TGCCGCTGCC GGCGGTCTTC
GAGCACGGCG ATCTGGCGTT CCCGAACCTC TACTTCGGAG GCCGGGACAC CAGGCTCGGG
GTCATCGACT GGGAGCGCTC GACGACGAGC GGCGTTCCGG GTCACGACCT GGTCTTCTTC
CTGCAGTTCG TCAGCGAGTC GCGGTGGTCG GCTTCCACCT GGCCCGCGCA GGTGGCAGCC
TTCCGGGACG CCTTCGTCGG CCCCGACGCC TGGGCGGTGC CGGTCCTCCG CGAGCACCTG
CGTCACCGTG GGGTCGATCC GACGTCGTGG GGACGCCTGG TGGTCATGAC CTGGGCCCGT
ACATCCGCCA CGCTGGCCGA TCGGCTCGTG CTGGACGAGG ACCGCGACGA CCTCTGTCCG
TCGGCGGCAG TGGAAGCAGC GGTCCGCTTG GAGCGGGAGA CGAGGCTCTG GCGTCTCGCC
GTGGAGTTGG CTGAACGTGG CGAGCTGGGG GATCGAGCGG GCTCCGCCTG A
|
|---|
| Protein sequence | MGSAPPSDDS GTRPRPPSVV GRGAPVTAEP SPSLQLHSWR RLDWRFLLPA LGDGPVVLAG
RPDEELRAAL PLLGLPVHRV TSDQDWEAVG GTASLVVLID PTPKDLGSAT GACRPGASVY
AEVRRSLCRL QGPWTLMGWR RAFAAAGLEE VSAHWHARTI DRSARIIPVE ARGAMRHALA
QHQGSWLRRI LAATARAAVG VGLLPALIPE GSVVGRYPEV AEGAGKNLVE RVLAENVDRL
GLSAVGLGAA LETAFLTPRF VTSRHVVVLV YAKGESRPRL VVKVPRQPDD SRGVRREADM
MRRLAALLGP DRLRVPAVLG TVACDGLSLL VESAIRGAVL TPPQAHRHFR TVLAAGTSFI
GALPVVRPAG ENADWYGPAV ERPLARLAEI APLAGETAAL CARTHELLAP LRSVPLPAVF
EHGDLAFPNL YFGGRDTRLG VIDWERSTTS GVPGHDLVFF LQFVSESRWS ASTWPAQVAA
FRDAFVGPDA WAVPVLREHL RHRGVDPTSW GRLVVMTWAR TSATLADRLV LDEDRDDLCP
SAAVEAAVRL ERETRLWRLA VELAERGELG DRAGSA
|
|---|
| |