Gene Gobs_0078 details

Gene Information

• Locus tag: Gobs_0078
• ID: 8751724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: +
• Start bp: 83909
• End bp: 84544
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 73%
• Product: type IV pilus assembly PilZ
• Protein accession: YP_003407259
• Protein GI: 284988705

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.970228
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATTG CCGGCGTGGA CTGGCCCGAG CCGGGCGGTG CAGCGGAGGT CATCCCGCTG 
GCCCGCGGTG TCGCGCTGCC CAGTTCCGTG GAGGTCTCCG ACGGGACCGC TCTCCTCGTC 
CGGCTCGTGC TGGCCGACTA CGCCGAGAAG CTCAAGGTCC AGCCGGGGCA CCGCGTCGAG 
GTCCTGTGGG GTGGCCCGAC GGGCGGGCGG TCGCTCCCCG CGGAGGTCAC CGAGATCCGG 
TCCGACCCGG AGCTGCGCTG GATCCTGCAG ATCACGGGCC CGGCCGAGGC CAGTCAGCGG 
CGTCAGTCGG TGCGTGCCCG CGTCGAGCTC CCGGTCGTGG CCCGGTGCGG AACCGTGATC 
ATCACCGGTC AGACCGTGGA TCTCAGCGAG GCGGGCGCCC GTGTCTGGTT CGACGGCTGG 
GGTCTGCAGC CGCCACCGGG CACCCCCATC GACGCGACGC TGGAGCTGGG GGACGGCAGC 
TTCACCGCGG CCGGTGAGGT GGTGCGCGTG GAACCTCGGG GACCGCGCTG GCTGATCTCC 
ATGAAGTTCC CGGAGCTGAC CGAGCAGGAG CAGGACCGGC TGCGGCGGCG GGTCTTCGAG 
GCACTGCGAC TCGAGCGCCT CCGCCAGGCC GACTAG 

 

Protein sequence

MSIAGVDWPE PGGAAEVIPL ARGVALPSSV EVSDGTALLV RLVLADYAEK LKVQPGHRVE 
VLWGGPTGGR SLPAEVTEIR SDPELRWILQ ITGPAEASQR RQSVRARVEL PVVARCGTVI 
ITGQTVDLSE AGARVWFDGW GLQPPPGTPI DATLELGDGS FTAAGEVVRV EPRGPRWLIS 
MKFPELTEQE QDRLRRRVFE ALRLERLRQA D