| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3560 |
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| Symbol | trmE |
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| ID | 3739859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3993637 |
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| End bp | 3995010 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637780849 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_386490 |
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| Protein GI | 78224743 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTGG AAGATACCAT AGCGGCCATC GGCACGCCGG TGGGGGAGGG GGGGATCGGC
ATCATCCGCG TGAGCGGTCC CGATGTCCCC GCCATTGCCC GGCGGATCGT CCGGCGGGTT
AACGAGAACG GTGACTTCGT GAGTCACCGT TTTTATTATG GCACCGTAGT GGATCCCGAG
TCGCGGGACA CCGTTGACGA GGTTATGGCG GTGCTGATGC GGGCACCCCG TTCCTTCACC
CGGGAGGATG TCCTTGAGAT CCAGTGCCAC GGGGGATACC TGGTCACCCG CCGGGTCCTG
GACGCGGTGC TCCAGTGCGG CGCCCGTCCG GCCGAGCCGG GGGAGTTTAC CCGCCGGGCG
TTCCTGAACG GCCGCATTGA TCTCGTTCAG GCCGAGGCGG TCATCGACGT GATCCGCTCC
AAGACCGAGG CGGCTCTCAA TCTGGCCCAG CACCAGCGGG AGGGGCGCCT CTCCGAGCGG
CTCAAGGCCG TGCAGGGTTG CCTGCGACAT AGTCTTGCCC TTGTTGAGGC GTTCATCGAT
TTCCCCGATG ACGAGGTGGA TCCCGCCTCC CGGGTGGAGA TCGAGGCAAA GGCCCGGGAG
GCCTCGGGCC GAATTGAAGA ACTCCTGGAG GGTTTCGACG AGGGGAGGGT GCTCCGGGAC
GGGGTGTCGG TCCTCATTGC CGGGAAGCCC AACGTGGGGA AGTCGAGTCT CCTTAATACG
CTCCTCCAGG AGAAGCGCGC CATCGTCACG TCGGTCCCCG GCACCACCCG GGACATCATT
GAGGAGGTGG TTAACGTCCG GGGCCTGCCG CTCCGGATGC TGGACACCGC CGGCATTCGG
GAGACTGAGG ATGTCGTCGA GCAGGAGGGG GTCCGTCTCA CCCTGGAGAA GATACCCCAG
GCTGACCTGA TCCTTTTCGT CCTCGACGGT TCCCGTCCCT TTGACGACGA CGACCGGATG
ATTCTTGCCG CCCTGGCGGA ACGGCGCGTA ATTGTCGTCA CGAACAAGAG CGATCTTCCG
GTCACCCTTC GTATTCCCGG CGAGCTGGAG GGTGTGCACA CCGTTGCTAT TTCCACTGCC
ACCGGGGCCG GCATCGACGA CCTGCGGGAG GCCGTTTTCG AAACCTTCAT TCACGGTCGA
GCCATTGACA GCCGGGAGTA TGTGGCCCTC TCGCAGACAC GGCACCGGGA TGCCCTGGTA
AAGGCTCGGG GAAGAATCGC CGTATTCTTC GCCAATCTGG CGGCGGGCAA CGATCTGGAA
ATTCTGGCCG TGGACCTCAG GGACGCCCTT GATGCCGTTG GGGAGGTTAC CGGCGAAACG
ACCCCCGATG ATATTCTTGA GCTTATCTTC CAGCGGTTCT GCATCGGGAA GTAG
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| Protein sequence | MYLEDTIAAI GTPVGEGGIG IIRVSGPDVP AIARRIVRRV NENGDFVSHR FYYGTVVDPE
SRDTVDEVMA VLMRAPRSFT REDVLEIQCH GGYLVTRRVL DAVLQCGARP AEPGEFTRRA
FLNGRIDLVQ AEAVIDVIRS KTEAALNLAQ HQREGRLSER LKAVQGCLRH SLALVEAFID
FPDDEVDPAS RVEIEAKARE ASGRIEELLE GFDEGRVLRD GVSVLIAGKP NVGKSSLLNT
LLQEKRAIVT SVPGTTRDII EEVVNVRGLP LRMLDTAGIR ETEDVVEQEG VRLTLEKIPQ
ADLILFVLDG SRPFDDDDRM ILAALAERRV IVVTNKSDLP VTLRIPGELE GVHTVAISTA
TGAGIDDLRE AVFETFIHGR AIDSREYVAL SQTRHRDALV KARGRIAVFF ANLAAGNDLE
ILAVDLRDAL DAVGEVTGET TPDDILELIF QRFCIGK
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