Gene Gmet_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3554 
Symbol 
ID3739853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3988471 
End bp3989040 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content60% 
IMG OID637780843 
Productamino acid-binding ACT 
Protein accessionYP_386484 
Protein GI78224737 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0217681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA CGAAGAAAAC GGATTCCCTT GCCCACTACG CCGTCACGGT TGTGGGAAAA 
GACCGCCCCG GTATCGTGGC CGCAACGGCC GGGGTCCTCT ACCGGCTGGG GTGCAACGTC
GAGGATTCCA GCTCCACCAT GCTCGGGGGG GAGTTCTCCA TGATTCTCAT CGTCTCCCAT
GAGAAACCCT TCAGCAAGGG GAGGATTCTG GAGGAGTTCC GGGGAGTGGC GGAAGAGATG
GGGCTCACGG TGGCGGCCCG GACCCTTTCC CCCGACGAGG TGGCCTACCA GGCGCCGGAA
GGGGAGCTCT GCATGGTTTC GGTCTACGGC TCCGACCGGC CCGGGATCAT CTACCGCGTG
ACAAATGAGC TGGCAGAGCG GAAGGTGAAT ATTACCGACC TCAATACCAA GCTCATCGGC
ACCAAGGAAG AGCCGGTCTA CGTCCTGATG CTGGAGGCGG CACTACCGGA AGGTATTGTC
GTGGAAGACG TGGCGGCAAT GTTCGACAAG ATTAAGAAGG AGATGAACGT GGAGATTTCG
GTGCGATCCA TCACGCCGGT CTCCCTCTGA
 
Protein sequence
MMSTKKTDSL AHYAVTVVGK DRPGIVAATA GVLYRLGCNV EDSSSTMLGG EFSMILIVSH 
EKPFSKGRIL EEFRGVAEEM GLTVAARTLS PDEVAYQAPE GELCMVSVYG SDRPGIIYRV
TNELAERKVN ITDLNTKLIG TKEEPVYVLM LEAALPEGIV VEDVAAMFDK IKKEMNVEIS
VRSITPVSL