| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3044 |
|---|
| Symbol | |
|---|
| ID | 3741240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3431741 |
|---|
| End bp | 3433336 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637780333 |
|---|
| Product | Acetyl-CoA hydrolase/transferase |
|---|
| Protein accession | YP_385984 |
|---|
| Protein GI | 78224237 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0427] Acetyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000000816099 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAGT ACGGCACACT GCAAGACCGC GTACGTTGCA AGTCACTGCT CAGTAAGGTC
ATGACCCCCG AGCAAACTGT CCAGTTTTTC AAGCCGGGCA TGAACCTCGG CTGGTCCGGT
TTTACCCCGG CCGGTTATCC CAAGGCAGTG CCCATCGCAC TGGCTGACCA CGTTGAGAAG
AACAACCTCC AGGGCAAGAT GAAGTTCAAC CTCTTCATCG GCGCCTCCGT CGGGGCCGAA
ACCGAAGACC GTTGGGCCAC CCTCGACATG ATCGACCGCC GTTGGCCGTA CCAGACCGGC
AAGAACATCG CCGCCGGCAT CAACGAAGGC CGCATCCGGA TGGGCGACAA GCACCTCTCT
CTTTTCGCCC AGGACCTTGG CTACGGCTTC TACACCAAGG ACAGCGAAAC CGGCAAGCTT
GACCTCGCCA TCATCGAAGT CTCCGCCATC ACCGAGGACG GCGGCCTGGT CCCCACAACC
TCCTGTGGCG TCATCCCCGA AATCCTCATG ATCTGCGACA AGATCATCGT CGAGGTGAAC
ACCGGCGAGC CCTCCTTCGA GGGGATGCAC GACATCGTTG TCTGCAACCA TCCGCCGAAG
CGCCAAATCC TCGGCATCAC CCATGCCGGC GAGCGGATCG GCACCACCTA CGTGCCGTGC
GACCCGAGCA AGATCATCGC CGTGGTCGAG TCCAAGCACC GGGACAAGGG GCGCGCCTTC
TCCGAGCAGG ACGACACCTC CGAGGCCATT GCCAACAACA TCATCGACTT CTTCAGCCAC
GAAGTGAAGA TGGGCCGTCT CCCCAAGAAC CTCCTCCCGC TCCAGTCGGG CGTCGGTTCC
ATCGCCAACG CCGTTATCGG TGGGCTGGCA AAGGGGCCGT TCACCAACCT GACTGTTTAC
ACCGAGGTTC TTCAGGACAC CATGCTTGAC CTCTTCGACT CGGGCAAGCT GGACGCCGCT
TCCTCCTGCT CCCTTTCCCT CTCGGAGACT CCGGGATTCC CCCGCTTCTT CGAGAACTGG
GATAAGTACT TCGACAAGAT CACCCTCCGG CCCCTCTCCA TCTCCAACGC GCCGGAACCG
ATCCGCCGCC TCGGGTGCAT CGCCATGAAC ACCCCGGTCG AGATCGACAT CTATGCTCAC
GCTAACTCCA CGCTGGTCGG CGGTACCCGG ATGATCAACG GCCTTGGCGG TTCCGGCGAC
TTCCTCCGCA ACGGCTTCCT GAAGATCATG CACACCCCGT CGAGCCGGCC GTCCAAGACC
GACCCGACCG GTATCTCCTG CGTGGTGCCG CACTGCTCCC ACATCGACCA CACCGAGCAC
GACCTTGACT GCGTCGTTAC CGAGCAGGGT CTGGCCGACC TCCGCGGTAT GGCGCCGAAG
GACCGGGCCA AGCGGATCAT TGAAAAGTGC GCACACCCGG ATTACAAGCC GATTCTCAGC
GAGTACCTGG AAATAGCCAC CAAAGACTGC CTCGCCAAGA AGGTCGGTCA CGAGCCGCAG
CTGTGGGACC GCGCCTTCAA GATGCATCTC AACCTGGCTC AGAACGGCAC CATGAAGATC
AAGAACTGGG ACGTGAAGAT CGACCTCTGC GAGTAA
|
|---|
| Protein sequence | MSEYGTLQDR VRCKSLLSKV MTPEQTVQFF KPGMNLGWSG FTPAGYPKAV PIALADHVEK
NNLQGKMKFN LFIGASVGAE TEDRWATLDM IDRRWPYQTG KNIAAGINEG RIRMGDKHLS
LFAQDLGYGF YTKDSETGKL DLAIIEVSAI TEDGGLVPTT SCGVIPEILM ICDKIIVEVN
TGEPSFEGMH DIVVCNHPPK RQILGITHAG ERIGTTYVPC DPSKIIAVVE SKHRDKGRAF
SEQDDTSEAI ANNIIDFFSH EVKMGRLPKN LLPLQSGVGS IANAVIGGLA KGPFTNLTVY
TEVLQDTMLD LFDSGKLDAA SSCSLSLSET PGFPRFFENW DKYFDKITLR PLSISNAPEP
IRRLGCIAMN TPVEIDIYAH ANSTLVGGTR MINGLGGSGD FLRNGFLKIM HTPSSRPSKT
DPTGISCVVP HCSHIDHTEH DLDCVVTEQG LADLRGMAPK DRAKRIIEKC AHPDYKPILS
EYLEIATKDC LAKKVGHEPQ LWDRAFKMHL NLAQNGTMKI KNWDVKIDLC E
|
|---|
| |