Gene Gmet_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3007 
Symbol 
ID3740996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3391747 
End bp3392268 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID637780296 
ProductAppr-1-p processing 
Protein accessionYP_385947 
Protein GI78224200 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.946141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGAAA AGATCGAGAT CATACCGGGG GATATCACGA AGCTGGCGGT GGACACCATT 
GTGAACGCGG CCAACAATTC GCTCCTTGGG GGGGGCGGGG TTGACGGCGC CATCCACCGG
GCCGCGGGGC CGGAGCTGCT GGCGGAGTGC CGGACCCTGA ACGGCTGCGC CACCGGCGAC
GCCAAGATAA CGAAGGGGTA TCGCCTCCCG GCGAAGCACG TGATCCACAC GGTGGGGCCG
GTGTGGCACG GGGGGGCTAA GGGTGAGCAA GAGCTTCTGA GGAGTTGCTA CCGCCGCTGT
TTCGAGGTGG CCCACGGGGC CGGTCTCACC TCTATCGCCT TTCCGGCCAT CAGCTGCGGG
GTCTACGGCT ATCCCCTGAC TGAGGCGTGC GCCATTGCCG TGGAGGAGAC GAAGACAGCG
CTGGAGCGCT ATCCGGAGCT AGCGCGGGTG ATCTTCACCC CCTTCGGTGC CGAGGCGGAG
GCCGCCTACC GGGCTGCCCT GGCGAAGGTG TTCGGCGCAT GA
 
Protein sequence
MREKIEIIPG DITKLAVDTI VNAANNSLLG GGGVDGAIHR AAGPELLAEC RTLNGCATGD 
AKITKGYRLP AKHVIHTVGP VWHGGAKGEQ ELLRSCYRRC FEVAHGAGLT SIAFPAISCG
VYGYPLTEAC AIAVEETKTA LERYPELARV IFTPFGAEAE AAYRAALAKV FGA