| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2868 |
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| Symbol | trmD |
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| ID | 3738925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3251020 |
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| End bp | 3251757 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637780159 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_385811 |
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| Protein GI | 78224064 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000000368483 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000000768669 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTCG ATATTTTGAC CCTTTTCCCT GCCATGTTCG AGGGACCGCT TACCGAAAGC
ATCATCCGGC GGGCAGTCGA GAAAGGGCTC CTTGATATCC GGTTGCACCA GATCCGTGAC
TTTGCCACTG ATCGGCACAA GGTTGTCGAC GATGCACCCT ATGGTGGTGG TGACGGGATG
GTCATGAAGG TTGAGCCGAT TGCCGCCTGT CTGGAAGCGG TCAAGGCCGA GCGCCCAAAG
GCGCGGGTCC TACTCACCAG CCCTCGGGGC CGTCTCTTCG ATAATGCGGC GGCCCGCGAG
CTGGCCCAAG AGCAGGAAGT CATCATTATC TGCGGACGGT ATGAGGGGAT CGACGAGCGG
GTCCGCGAGC TTTTCGTGGA GGATGAGTTT TCAATCGGCG ATTTTGTCCT CACTGGCGGA
GAGTTGGCAG CCATGGTCAT GATCGACGCC ACCGTGCGGT TTGTTCCCGG AGTACTCGGC
TCGCCCGGGT CGGCCGAAAC TGACACGTTC TCCGACGGCC TGCTTGAGTA CCCTCACTAT
ACGCGTCCTG CCGAATTTCG CGGCCATTCG GTCCCGGCTG TGCTGTTGTC CGGCAACCAT
GCAGAAGTGG CGCGTTGGCG ACGTCGCAAG GCCTTGGAGG AAACGATCCG TTCGAGACCG
GATTTGCTCG AAAAGGCAGT GCTGGATAGT GACGACCGGC GCTACCTGCT AGAACTCGAA
GAGGGAGCCT CGAAGTGA
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| Protein sequence | MKFDILTLFP AMFEGPLTES IIRRAVEKGL LDIRLHQIRD FATDRHKVVD DAPYGGGDGM
VMKVEPIAAC LEAVKAERPK ARVLLTSPRG RLFDNAAARE LAQEQEVIII CGRYEGIDER
VRELFVEDEF SIGDFVLTGG ELAAMVMIDA TVRFVPGVLG SPGSAETDTF SDGLLEYPHY
TRPAEFRGHS VPAVLLSGNH AEVARWRRRK ALEETIRSRP DLLEKAVLDS DDRRYLLELE
EGASK
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