| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2658 |
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| Symbol | |
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| ID | 3740178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3004695 |
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| End bp | 3007706 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637779943 |
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| Product | PDZ/DHR/GLGF:ankyrin |
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| Protein accession | YP_385601 |
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| Protein GI | 78223854 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.172871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCCAG TTCGGCGAAT GATCAGGCGG AAAGCCGCGT TGCTGGCAAC AGCGGTACAG
ATTTTAGCTC TGCTCCTGGG CATGCCGGGG CTGGCTGCCT CCAGGCCGCC CAAGCAGCAG
GTGTCCAAAC CGTCGCAGCA GGCACCCAAG CCGCCGACGC CTCAGGCACC CAAGCCGTCG
GTGGAGCGGC AGCCCGCGCC CAGCCTCTTC ACGGAGGCCA CCTTCCTGTT CCTCAGGGGG
GCTAAGGTTG CCCCCCGATG GGTGCTCCCC CCCACGGAAA AGACCAGAAC CGACGCCATC
TTCAGCGTCA GTGCCGCAGG TGCCCCCGTT GTGGCGTTCA GCGGTGATTC TGATACATAC
CACCTGCTCT ACCCCGACAG AAACTTCATG GTGGCCGTGA AAGCCGCGAT CTCAGGGATG
ACCCACCTCT CCAACGGCGT GTTCCTCCTG TCGGCCGGCA ATGATCTGCT GCTCCTCGCC
GAGCCCAGGG AGAAAACCCT GGACAAGAAG GGGGTACCCT ATGCGGCGCT GCAGCCCGTG
ACGAAAGTAC CCCTGCGCAA AATCGATGTC CTGACCAGCG TCGGCACAAC CGTCTACTGT
GCCGGCATCG ACGCGCGAAG TGGTCGCCAT GCTCTCTACC TGCTCCGCTC CCTCAAGGGG
GGCGGCATCC TCGACATGGA GCTGGCCTAT GAGTCGGGCG AGCCCATCAC CGCCGTTACG
GGCGATGCTG AAGCCCTCTA CGTGGCCAAG GGGCGAACGG TCGCCCGCTA TTCCGTGAAG
GACGGCGCTG AGAGCACCTA CTACACCCAC CCCTCGGCAT CCGTGACGGG GCTGGCCATG
ACGCCGGCCG GCCTTGTGGT CAGCACCGGC AGGGAGATCG TCCTCGCCGG CCAGGGCGGA
GCCCTGGAGA TCATGCGCTC GGCGGGGTAT GGGCACCGGA TGGCCATGGC TGGCGATACC
CTCTACGTGC TGTTCAATAC CTCCCTGGGG GTGCTGGCCC TCGACAACCT GGCGGACCTC
AGGCGCTTCA ACCTGGCGGT GAGGCCCGTG GCCCCTGGCG AGGCGGCGCC TCCCTGTGCC
ATTGCCGGCG TCAGCTTCTA TGAGAGCGAT ACTCTCGACA ATACCCGGGG ATTCGCCGAA
AGCTTCGACC GCAAGGATGT GCGGCGCATC GTGGCCCGGA TCGAATTCGA TCAGGCCTCT
CTTTCCCGAA GCCGTGGGGG GCATTCGGTT ACGGTCTCCT GGCATGAGCC GACCGGCGGC
ATGCTGAAAA GCGCCAACTA CCAGGTGACA CAGGGTTCCG ATGACCCGCT CTTTGCCGCC
ATCGGCGGAA AAACAGAGAA TGGTTACTCT CCTCCCCACT GGAAGATCGG CGGGGTGCAC
TACAGGTTTA CCGATGAACT CGGGAACCGC TATCCCGGCC GCTATCGAAT GCGGGTAGAG
GTGGATGGCA TCCCCGCCGG GGAGTGGTCC TTCACGCTTG CCGGACAGCC GGACCCCTGG
CAAGCCATTA GCTACGATGA CATGGCTACC CTTACTGCCC TGCTGGATCA GGGGCTCAAT
CCCAACACCA CCTCCGAGAG CGGCGAACCG CTCCTTTCCA CAGCCGTGCA GTTCGGTTCC
GCCCGGGCGG TGCAATTGCT TCTGGAGCGG GGTGCCAATC CCAACGCAGT CGACAGGGAG
GGGAAATCGC CGCTGACCAT GGTCGAATAC GTTGGCGACT GGCGGACCAA GGCCGAACTG
CTGGTGCGTC GCGGCGCCAA CGTCAACGTC CGGCGGTTCC CTGGCGGCCC GCCGCTGGTG
TCCAGCTATT CAGCCGACTT TGCCGCGTTT CTGCTGAAGA ACGGGGCCGA CTTCCGGTAT
GAAATGAGTT ATGGCAAGCA GAGCCTCCTC AGTGAAATGA GCGACAGCAT CTGCACAGAT
GAAATCCTGT CGCTTCTCCT CCAGCGAGGG GCAGACCTGA ACGAGACTGA TTCGATTGGA
CAGTACACCC CTCTTGGCAG CGCCATCTTC TCCGGTCGGG AAAAATGCAT GCAGCTCCTC
CTGGAGAAGG GGGCTTCGAC CGCCGTGGCC CAGAGGCAGC CGAACCGCCC GACACGCTCC
GCGATCTATG TGGCCTTGAA CACCCTCAAC GAACGTTCGG ACCCCAAGGC CAAGATTGCG
CAGCGGCGCA TGGTGCGCCT GCTGCTGCAG AAGGGGGCCG CCCTCAGGCC GGGGAAGAAG
CTGACGACGT CGGCATACTT CGATATCCCG AAGGATGACT ACATAAAGCA GATGGATGAA
ACCGCCTCAA TCGGCGCGGG AGAGGGTCGG CTCATGTTCC TTGGCGAGGG GCCGTCGTTC
TTCGGGACGG TGGACATGAT CAGGACCCTT GAGCAGGACG ATGCGGCCCT GGAGGCGGCC
ACCGATTCAA AGGACCCGGC GATACGGGAG CTGGCCCTCG GCACCCATCT GGGGAGGGTC
CGGGAGCTGG TGGCCAGGGC AAGGAATCAA TACGACATGG GATATGAAGT CCATAAGCAC
TGTGTGCAGG CATTCAAGCT GTCCGAGGCC GGCTACCGCC CCGCCCAGGT GGATATCGTG
CCCGAAATGT CGCCACCCCA GGCAGGGGGG CAGGGGAAGC CGCAGATGGG GCTGAAGCTG
CTGAAAAGGG CCGAGGGGGG CGCCTACGTC CAGGCGGTTG CGCCGGGAAG CCCCGCCGAG
CGTGCCGGGG TGAAGGCCGG CGATATCATC CTGGCGTTTG ACACCCAGAG AATGAAGGAT
GTGGACGAGG TTTTAACTGC CGTTGCCCGG CTGACTCCGG GGATGCCGGT GCGGGTGACC
TTCCTGCGCG ACGAGCCGAT GCGGCTGCCG GACCTGCAGC TTACCTGTGG TCTGGTGGAG
TATGAATACA AGGATCATTG GGGATACGCG GAGATGAACC TGTCCCGCTG GCTGGCCGCG
CACCCCGATG AGGCCGTTTC CGATGAGGTG CGGACGAGGC TCAAGGACAT TGCGGCGGGC
GGAGGGAAGT AG
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| Protein sequence | MDPVRRMIRR KAALLATAVQ ILALLLGMPG LAASRPPKQQ VSKPSQQAPK PPTPQAPKPS
VERQPAPSLF TEATFLFLRG AKVAPRWVLP PTEKTRTDAI FSVSAAGAPV VAFSGDSDTY
HLLYPDRNFM VAVKAAISGM THLSNGVFLL SAGNDLLLLA EPREKTLDKK GVPYAALQPV
TKVPLRKIDV LTSVGTTVYC AGIDARSGRH ALYLLRSLKG GGILDMELAY ESGEPITAVT
GDAEALYVAK GRTVARYSVK DGAESTYYTH PSASVTGLAM TPAGLVVSTG REIVLAGQGG
ALEIMRSAGY GHRMAMAGDT LYVLFNTSLG VLALDNLADL RRFNLAVRPV APGEAAPPCA
IAGVSFYESD TLDNTRGFAE SFDRKDVRRI VARIEFDQAS LSRSRGGHSV TVSWHEPTGG
MLKSANYQVT QGSDDPLFAA IGGKTENGYS PPHWKIGGVH YRFTDELGNR YPGRYRMRVE
VDGIPAGEWS FTLAGQPDPW QAISYDDMAT LTALLDQGLN PNTTSESGEP LLSTAVQFGS
ARAVQLLLER GANPNAVDRE GKSPLTMVEY VGDWRTKAEL LVRRGANVNV RRFPGGPPLV
SSYSADFAAF LLKNGADFRY EMSYGKQSLL SEMSDSICTD EILSLLLQRG ADLNETDSIG
QYTPLGSAIF SGREKCMQLL LEKGASTAVA QRQPNRPTRS AIYVALNTLN ERSDPKAKIA
QRRMVRLLLQ KGAALRPGKK LTTSAYFDIP KDDYIKQMDE TASIGAGEGR LMFLGEGPSF
FGTVDMIRTL EQDDAALEAA TDSKDPAIRE LALGTHLGRV RELVARARNQ YDMGYEVHKH
CVQAFKLSEA GYRPAQVDIV PEMSPPQAGG QGKPQMGLKL LKRAEGGAYV QAVAPGSPAE
RAGVKAGDII LAFDTQRMKD VDEVLTAVAR LTPGMPVRVT FLRDEPMRLP DLQLTCGLVE
YEYKDHWGYA EMNLSRWLAA HPDEAVSDEV RTRLKDIAAG GGK
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