| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2396 |
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| Symbol | sdhA |
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| ID | 3740434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2706806 |
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| End bp | 2708719 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637779688 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_385346 |
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| Protein GI | 78223599 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000124649 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATACTCG ACGGAAAATG TCCGACTGGA CCAATTGAGA AAACATGGGA CAAGCACCGC
TTCGACATGA AGCTGGTTAA CCCCTCCAAC AAGCGTAAGT ACAAGATCCT TGTCGTTGGG
ACCGGCCTTG CCGGCGGCGC CGCTGCCGCG TCCCTCGGTG AACTCGGCTA CAATGTCGAG
GCTTTCTGCT ACCAGGATAG CCCCCGCCGC GCCCACTCCA TCGCTGCCCA AGGGGGGATC
AACGCCGCCA AGAACTACCC GAACGACGGT GACAGCATCT ACCGTCTCTT CTACGACACC
ATCAAGGGGG GCGACTTCCG TGCCCGCGAG GCCGACGTCT GGCGTCTGGC CCAGGTTTCC
AACAACATCA TCGACCAGTG CGTGGCCCAA GGTGTTCCCT TTGCCCGTGA CTACGCCGGC
TATCTGGACA ACCGCTCCTT CGGCGGCGCC CAGGTTTCCC GTACGTTCTA CGCCCGGGGG
CAAACGGGGC AGCAGCTCCT GCTCGGCGCC TACTCGGCCC TTGCCCGCCA GATCAAGGCA
GGGACCGTCA AGATGTTCCC CCGCACCGAG ATGCTTGACC TGATCGTTGT TGACGGTGAG
GCCAAGGGGA TCACAGTCCG TGACCTGGTT ACCGGCGAGA TTCGTAGCCA CGTGGGTGAC
GCGGTTGTGC TCTGCACCGG CGGCTACGTG AACGTCTTCT ACCTCTCCAC CAACGCCATG
GGGTGCAGCG TTACCGCCGC CTGGAAGGCC CACCGGAAAG GCGCCTTCTT TGCCAACCCC
TGCTACACAC AGATTCACCC GACCTGTATT CCGCAGCATG GTGACAAGCA GTCCAAGCTG
ACTCTCATGT CAGAGTCGCT CCGTAACGAC GGCCGTTGCT GGGCTCCCAA GAAGAAGGGC
GACAAGCGCG CGCCGGGGGA GATTCCCGAG GAAGAGCGTG ACTATTACCT CGAGCGGAAG
TACCCGAGCT TCGGTAACCT GGCTCCCCGT GACATCGCCT CCCGCGCCGC TAAGGAGCAG
TGCGACGACG ATCGTGGCGT TGGACCGGGT GGTCGCGGTG TTTATCTTGA CTTCGCCGCT
TCCATCAAGC GCCTCGGTGA AGACACGATC CGCGAGCGGT ACGGCAACCT CTTCGAGATG
TACGAGAAGA TCACCGACGA GAATGGCTAC AAGGTGCCGA TGCGTATCTA CCCGGCACCC
CACTATTCAA TGGGTGGTCT CTGGGTTGAC TACAACTGCG AGAGCAACGT TCCCGGTCTC
TTCGTTCTGG GCGAGGCAAA CTTCTCGGTT CACGGGGCGA ACCGTCTTGG CGCCAGCGCC
CTCATGCAGG GTCTTGCCGA CGGTTACTTC GTCATTCCCT ACACCATCGC CAACTATCTG
GCCAAGACGG CTCCGGGCAA GGTCAAGGCC GATAACCCCG AGTGCAAGAA GTCGGTTGAC
GATGTAAATA ACAACTTGAA GAAGCTCATG TCGATCAACG GGAAGAAGAC TGTCAGCGAA
TTCCACCGCG AGCTGGGCAG GATCATGTGG GAGAACGTCG GCATGGCCCG CAGCGAGCAG
AGCTGCAAGG AAGCCCTCAA GAAGATCCCC GCACTTCGTG AAGAATTCTG GAAGAACGTC
AAGGTCAGCG GTTCTGGCGC CCAGTTCAAC CAGGACCTGG AGAACGCCGG TCGCGTAGCT
GACTTCCTTG AATTCGGGGA GCTTCTGACC CGCGACGCCC TCTACCGTAA CGAGTCCTGT
GGTGGTCACT TCCGGGTCGA GCACCAGATG CCTGACGGCG AAGCAAAGCG CGACGACGAA
AACTTCTGCC ACGCTGCTGC ATGGGAGTTC AAAGGGGCTA ATGCAGAGCC TGAACTCCAC
ATCGAACCTC TGAAGTTTGA AAACGTCCAT CTGGCGATAA GGAGCTACAA ATAA
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| Protein sequence | MILDGKCPTG PIEKTWDKHR FDMKLVNPSN KRKYKILVVG TGLAGGAAAA SLGELGYNVE
AFCYQDSPRR AHSIAAQGGI NAAKNYPNDG DSIYRLFYDT IKGGDFRARE ADVWRLAQVS
NNIIDQCVAQ GVPFARDYAG YLDNRSFGGA QVSRTFYARG QTGQQLLLGA YSALARQIKA
GTVKMFPRTE MLDLIVVDGE AKGITVRDLV TGEIRSHVGD AVVLCTGGYV NVFYLSTNAM
GCSVTAAWKA HRKGAFFANP CYTQIHPTCI PQHGDKQSKL TLMSESLRND GRCWAPKKKG
DKRAPGEIPE EERDYYLERK YPSFGNLAPR DIASRAAKEQ CDDDRGVGPG GRGVYLDFAA
SIKRLGEDTI RERYGNLFEM YEKITDENGY KVPMRIYPAP HYSMGGLWVD YNCESNVPGL
FVLGEANFSV HGANRLGASA LMQGLADGYF VIPYTIANYL AKTAPGKVKA DNPECKKSVD
DVNNNLKKLM SINGKKTVSE FHRELGRIMW ENVGMARSEQ SCKEALKKIP ALREEFWKNV
KVSGSGAQFN QDLENAGRVA DFLEFGELLT RDALYRNESC GGHFRVEHQM PDGEAKRDDE
NFCHAAAWEF KGANAEPELH IEPLKFENVH LAIRSYK
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