| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2236 |
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| Symbol | |
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| ID | 3738190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2529320 |
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| End bp | 2530120 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637779528 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_385188 |
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| Protein GI | 78223441 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0079693 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000000000146791 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAAAAA TTGAAGACAA ACCGGTTTCC GGTCTTCTTG ATCTTTCAGG CAAAAGGGCG
GTTGTTACTG GCGCGGCAGC TGGAATTGGC TATGCGATTG CCAAACGGCT GGCGGAGGCG
GGAGCCACTG TTCTGATTAC TGATATCAAT CGAGAAGCGA TTGAAGAGGC GGAACATAGA
TTGAGCAGCA TGAAGTGTAA AGTTAAAAGT CTGGTGTCAG ATGCCGGCCG GGAAGCCGAT
ATAAAATCTT TGTTCTCGTA CGTTGCTGAT AGCTTTGGCG GTGTTGATAT CTTGGTGAAC
AATGCCGGAA TTTATCCTGC CACCAAAATT TTGGATATGT CGCTAGAGCA GTGGCGGGAG
GTAATCAGGA TCAATCTTGA AAGTGCCTTC CTCTGTTCTC AGGAAGCTGG TCGTATCATG
GTCCGGCAGG GGACGGGAGG AGTGATTGTC AACATATCTT CCATGGCAGC ACTAAAACCA
TGCTTTCCGG GTCTGGCCCA TTATGGAGCC TCAAAAGGAG GGGTTGTAAA TCTTACGCGA
AGCACGGCCC TGGAACTGGC GCCACACAAG ATACGCGCTG TAGCCGTTGT TCCGGGGGGG
ATCCTGACGG GAGGGGTCCG TTCCAATCTG AAACAGAGCG AGGAAAAGGA TTCACTGCAA
TCCATTGGTG CCACCATTCC CCTCGGCGGG TTTGGCCAAC CAGACGACAT AGCCAGAACA
GTGCTTTTTC TCGCATCGGA TTCAGCAGCG TACATCACTG GCACAACCAT ACTTGTTGAC
GGCGGTGCGA TGCTGGTTTA A
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| Protein sequence | MLKIEDKPVS GLLDLSGKRA VVTGAAAGIG YAIAKRLAEA GATVLITDIN REAIEEAEHR
LSSMKCKVKS LVSDAGREAD IKSLFSYVAD SFGGVDILVN NAGIYPATKI LDMSLEQWRE
VIRINLESAF LCSQEAGRIM VRQGTGGVIV NISSMAALKP CFPGLAHYGA SKGGVVNLTR
STALELAPHK IRAVAVVPGG ILTGGVRSNL KQSEEKDSLQ SIGATIPLGG FGQPDDIART
VLFLASDSAA YITGTTILVD GGAMLV
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