Gene Gmet_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2035 
Symbol 
ID3739815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2278713 
End bp2279747 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content51% 
IMG OID637779329 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_384989 
Protein GI78223242 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000000576701 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.089739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTTT ATTCATTCGA CGTAGCACCG AATCTAACTC TTTCCTCCTG TGACGAGGCT 
GCGGAACAAA TAATCGGAAC TCCTGCAGCC CTTCTCGCCG GAAAGCCTTA TTATGAAGTG
TTCCCGCGAG TATTGTATCA GGACCGCGAT GCGGTGGCGG AGGTCGTCCA AAGCGGCATT
CCTCTATTGC TGCGAGATTA TTCGGTTATT TGTATTTTGG GAAGGACTTT GGCTGATATA
CGTTTAGAGC CCGTCCTGAA TCAGGAGAGC GCTGTGGGGG CGGTTCGGGT TTCCGTGTGC
GCTTCCGAAA CCTGTTCAAG AGCCTTGGAG TTGAAAGGGG CCAGTACGCT TATCGATATT
GGCAAGGTGT CCGCCACTCT TGCCCATGGC GTTCGAAATC CGCTCAACGC GATAAAGGGG
GCAGTAGTAT ATCTCAAGCA CCGCTATGGC TCCGATGAAA CATTTGTGGA ATTTGCGGAC
ATCATCGACG AGGAGATTGC AAAGCTCGAT GGATTCATAA CCAAGTTCCT CAGTACGTCG
CTCCTGGAGA TGGAAAAATC GCGCAGCGAC CTCCATGTGC TTCTTGAAAA AGTATTGAAG
ATTACATCGC TTCAGGCACA GGAACGCGAT ATCCGGTTTG TCTGCGATTA CGGGGATGTT
CCGTTCCTCG AGTTTGATGC TTTCCATCTG GAGAGTGCAA TACTCAACAT TGTCAACAAT
GCCATTGAGG CTATGGGGAG CGGCGGCACC ATTACGTTCA GAACCCGTTT GGACACTATG
GCGGACAGGA GACAGGTGAC ACTCGATATC TCAGATTCCG GGCCGGGGAT ACCTGAGGGG
GCTTTCCACA ATCTGCTTTT ACCACCACGT GGCAACACTC GGGACAAGGG GCGGGGGTTC
GGTCTTTTTA TCTCTCGGGA GATCATTCAG TATCACGGTG GAAGTCTTGA AATAATAAAC
TCCAAGGGAA ACGGTGCGAC CGTGCGTCTC AGCCTTCCTG TAGAGAGTTC TCATGGAGAA
ACTCATGCAG GGTAA
 
Protein sequence
MVFYSFDVAP NLTLSSCDEA AEQIIGTPAA LLAGKPYYEV FPRVLYQDRD AVAEVVQSGI 
PLLLRDYSVI CILGRTLADI RLEPVLNQES AVGAVRVSVC ASETCSRALE LKGASTLIDI
GKVSATLAHG VRNPLNAIKG AVVYLKHRYG SDETFVEFAD IIDEEIAKLD GFITKFLSTS
LLEMEKSRSD LHVLLEKVLK ITSLQAQERD IRFVCDYGDV PFLEFDAFHL ESAILNIVNN
AIEAMGSGGT ITFRTRLDTM ADRRQVTLDI SDSGPGIPEG AFHNLLLPPR GNTRDKGRGF
GLFISREIIQ YHGGSLEIIN SKGNGATVRL SLPVESSHGE THAG