Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1970 |
Symbol | |
ID | 3740150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2199634 |
End bp | 2201004 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637779264 |
Product | transmembrane protein |
Protein accession | YP_384924 |
Protein GI | 78223177 |
COG category | [S] Function unknown |
COG ID | [COG4267] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.233998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0408666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGCA TCGGCTTCGA ACTGCGCAAA CTGCTCAAAC GCGACACCTT TTTTTCACTG CTGCAGACCT ATGGCTATGC CGGGATTATC AGCTCCGGCC CCTGGGTGCT CTCCATCTTC GCAGTGATGT TGATTGGCTT CATTTCGCTG CCGGTCGTCA TCCCGCCAGT TCTGGTATCG CAGTTCCAGA CATCCATCAC GTACCTGATC GCCCTTTCCC TGATCTATAC GGGCTTGTTC CAACTGGCCT TCACCCGCTA TTCGGCCGAC AGAATCTTTG AAAAGGAACA CTTCAGACTG CTTCCCAATC TGAACGGCCT GCTCCTCTTG GTGACCACTG TCGGAGGTCT GGTTTCCTTC CCCCTGGCCA TCGTGCTGTT CCCCCAGACA TCGCTGATCT ACCGCCTTCT CTTCGCAACC ACCTTTGTTA CGGTCTCCTG CGTCTGGATG GCCGCCATTC TTCTTTCAGG CCTGAAAGCC TACAAGACAA TACTGTATAA TTTCGCCCTC GGCTATGGTA CCGCGCTGTT TCTTGCTTTT TTCCTGCGGA CCTGGAAGCT GGAAGGACTG TTGCTGGCAT TCCTGACCGG CCAGTTTGTG CTCCTCAAAG GGATGCTGTT TGTAATTTTC CGCAACTACC CGTCACGCAC CTTCGTGGAG TTCGATTTTC TGCGCAAGCG GCGAGTGCAT TACTCCCTGA TGCTTACCGG CTTCTTCTAC AACCTGGCGA TTTGGGCCGA TAAATTTGTT TTCTGGTTTC ACCCCTATAC CGGCAGCAAC GTGATCGGCC CCCTGCACGC TTCGGAAATA TATGATTTTC CGATATTCCT CGCCTATCTT TCAATTCTGC CCGGCATGGC CGTGTTCCTG GTGCGGATGG AAACCGATTT CGTCGAGTAT TATGATCGGT TCTATGATTC GGTTCGCGAA GGGGGATCAC TGACCACCAT ACAGGCTATG AAGAATGAAA TGGTACACAC GGCACGGGAA GGGATCTACG ACATCATCAA GGTCCAGTCC ATCGCCACCA TCATCATATT CCTCTTTGGC CCCGCCATGC TCTCCCTGGC GGGAATCTCG CTGGTTTACG TGCCGTTGCT TAACATCGAC GTGGTTTCTA CCGGTCTGCA GGTGGTTCTG CTGGGGCTCA TCAACATCTA TTTCTATCTT GACCGGCGAG AACGCGCCCT GCTCCTGACA GTACTGTTTG CCACCCTGAA TTTCATTCTA TCAATCATAT CCATCAACCT CGGCCCGTAC TTTTACGGCT ATGGTTTTGC CGGTTCGCTG TGCATAACGA TCATGTGCGG CATGTTCCTG CTGGACCGGG ATCTGGACAC ATTGGAGTAC AAGACCTTCA TGCTGCAATA G
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Protein sequence | MAGIGFELRK LLKRDTFFSL LQTYGYAGII SSGPWVLSIF AVMLIGFISL PVVIPPVLVS QFQTSITYLI ALSLIYTGLF QLAFTRYSAD RIFEKEHFRL LPNLNGLLLL VTTVGGLVSF PLAIVLFPQT SLIYRLLFAT TFVTVSCVWM AAILLSGLKA YKTILYNFAL GYGTALFLAF FLRTWKLEGL LLAFLTGQFV LLKGMLFVIF RNYPSRTFVE FDFLRKRRVH YSLMLTGFFY NLAIWADKFV FWFHPYTGSN VIGPLHASEI YDFPIFLAYL SILPGMAVFL VRMETDFVEY YDRFYDSVRE GGSLTTIQAM KNEMVHTARE GIYDIIKVQS IATIIIFLFG PAMLSLAGIS LVYVPLLNID VVSTGLQVVL LGLINIYFYL DRRERALLLT VLFATLNFIL SIISINLGPY FYGYGFAGSL CITIMCGMFL LDRDLDTLEY KTFMLQ
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