| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1885 |
|---|
| Symbol | |
|---|
| ID | 3739161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 2099875 |
|---|
| End bp | 2100594 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637779176 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_384839 |
|---|
| Protein GI | 78223092 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00000732794 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00000000475833 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAGC TTGGCGTAAA TATTGACCAC GTGGCAACAA TCAGGCAGGC GAGGGGAGGA
GTGGAACCCG ATCCCGTGGC TGCCGCCGCT CTGGCGGAGT TGGCCGGAGC CGACGGGATT
ACCATTCACC TGCGGGAAGA CCGCCGTCAT ATCCAGGACC GGGACCTGAA ACTCCTTCGC
CAAACCGTGA AGACCAAGCT CAATCTGGAG ATGGCGGCAA CGGCAGAGAT GGTTGCCATA
GCCCTCTCCG TAAAGCCCGA CATGTGCACT CTCGTTCCCG AAAAGCGTCA GGAGCTCACT
ACCGAAGGTG GACTGGATGT GCGAATTGCC ATGCAGGGGA TTGCTGAAGC GGTGGAAAGG
CTCCAGAATG GCGGCATCGC GGTGAGCCTC TTTGTCGATC CCGACCCCGA CCAGGTGAAG
GCTTCCAGCA AGGTTGGATC CGACTACATC GAGATACACA CCGGGGCCTT TGCCGACGCA
AAGGATTGGA AGTCCGAGCA GGATGAGTTG GAGCGGATTG GGAACGCCAT TAAGCTTGGC
GCCAAGCTCG GTCTCGGTAT CAATGCCGGT CATGGCCTTA ATTACACCAA CATCAGGAAG
GTTGCGGCCC TGGGGGGCAT CGAGGAGTAT AACATCGGCC ATTCCATCAT CTCCCGGGCG
GTCCTTGTGG GACTCGACCG GGCAGTGCGC GACATGGTGG ATCTCATCAA GTACGCCTGA
|
|---|
| Protein sequence | MAKLGVNIDH VATIRQARGG VEPDPVAAAA LAELAGADGI TIHLREDRRH IQDRDLKLLR
QTVKTKLNLE MAATAEMVAI ALSVKPDMCT LVPEKRQELT TEGGLDVRIA MQGIAEAVER
LQNGGIAVSL FVDPDPDQVK ASSKVGSDYI EIHTGAFADA KDWKSEQDEL ERIGNAIKLG
AKLGLGINAG HGLNYTNIRK VAALGGIEEY NIGHSIISRA VLVGLDRAVR DMVDLIKYA
|
|---|
| |