Gene Gmet_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1820 
Symbol 
ID3741497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2034076 
End bp2034828 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content59% 
IMG OID637779104 
ProductABC transporter-related protein 
Protein accessionYP_384774 
Protein GI78223027 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGG TTCAGGGAAT CACGCAACGT TTTGGTGGGG TCACCGCCCT CGAAGATGTC 
TCCTTCCGGG TGGCGGATGG GGCCATCACC GGCATCATCG GTCCCAACGG CGCCGGGAAA
ACCACGCTCT TCAATATTGT GACCGGCATC TATACGCCAA CCTGCGGTAC GGTGCATCTG
CAGGGAAAGA ACGTGACCCG TTTCACGCCG GAACGGCTGG CTTCCCTCGG CATGGTCCGT
ACCTTCCAGA ATATCGAGCT CTTCGGCAGG ATGACGGTGC TGGAGAATGT GATGGTCGGT
CTCCACACGA AAGGGAAGAG TGGCATCATC GCTTCGTCTC TCAGGCTTCC CTGGCAGGTG
GCCGAAGAGC GAAGGTTCCG GGAGCGGGCT CTTCACTGGC TCGAATTCAC GGGGATCACC
GACCTGGCTG ACCATGAGGC GGGGAGTCTT CCCTTTGGCA AGGGTCGACT CCTTGAAATC
GCCCGGGCAA TGGCCCTAGA GCCGAAGGTA ATTCTCATGG ACGAGCCGGC CGCAGGCCTC
AACAGCCGGG AAACCCTTGA GCTGGCGCGT CTCATCCAGA AAATCCGGGA ATCGGGTGTC
ACCGTTGCCC TTGTGGAGCA TGACATGGAA CTCGTCATGG ACATCTGCGA CGCCATCGTG
GTTCTCAATC TGGGGCGCAA GCTGGCCCAA GGGACGCCGC GGGAAATTCA GGAAAATCCG
GAAGTGATAT CAGCCTATCT CGGGGAAGGA TAG
 
Protein sequence
MLEVQGITQR FGGVTALEDV SFRVADGAIT GIIGPNGAGK TTLFNIVTGI YTPTCGTVHL 
QGKNVTRFTP ERLASLGMVR TFQNIELFGR MTVLENVMVG LHTKGKSGII ASSLRLPWQV
AEERRFRERA LHWLEFTGIT DLADHEAGSL PFGKGRLLEI ARAMALEPKV ILMDEPAAGL
NSRETLELAR LIQKIRESGV TVALVEHDME LVMDICDAIV VLNLGRKLAQ GTPREIQENP
EVISAYLGEG