| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1644 |
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| Symbol | |
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| ID | 3740413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1845016 |
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| End bp | 1846668 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637778928 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_384600 |
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| Protein GI | 78222853 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAA ATCGTGATGC AGCCCGTGCC AGCCTGGAAA ACCTCTACCG GATCTTCACC
GTGCCGGAAG CACCCGACTC GACCCTCGGC GCTATTGATC AGGCGATTGC CGGCGATGTC
GCCGGCTTCC TGCAGACCCA TATCGTCGCC ATCGAACGCC CTCTCGAAGA GATCGAAGCG
GATTTCTCCT CCTTCTCCAT ACCCGAGGAA CCGACCTACG TCTCCGAGTA TACCGAATTC
GTCAAAGAGA ACCTCGTCGC CCACTCGGTC CATACCGCCT CACCGGCCTT TGTCGGCCAC
ATGACCTCGG CGCTCCCCTA CTTCATGCTC CCGCTGGCAC GCCTCATGAC CGCCCTCAAC
CAGAATGTGG TCAAGGTGGA GACATCCAAG GCCTTTACGC CCATGGAGCG CCAGGTCCTT
GCCATGCTTC ATCACCTGGT CTATGGCCGG AATGACGACT TCTACCCGCA ATGGATTCAT
AACAGCCAGC ATGCCTTGGG GGCCTTCTGC TCCGGCGGCA CCCTCGCCAA CGTCACGGCG
CTATGGGTGG CGCGCAACCG CCTGTTCGCT CCGGACGGAG AGTTCCGCGG CATTGCCCAG
GAAGGGTTGG CCCGTGCCCT GAAACATCGC GGCGCGGACG GGATTGCCGT TCTCGTTTCC
GAGCGCGGCC ACTACTCTTT GGGCAAGGCC GCCGACCTCC TCGGTATCGG CAGGGATGAC
CTGATTAAGA TAAAGACGGA TGCAAACAAC CGTATCGACC TCAAGGCGTT GAGAGAAGAA
TGCCGGCGAC TGCAGGATCG GAACACCCTC CCGCTGGCTC TGGTCGGCAT CGCCGGGACG
ACCGAAACCG GCAACGTCGA CCCGCTGGAG GCAATGGCCG ATTTAGCCCA AGAGCTCGGC
TGTCATTTTC ATGTGGATGC CGCCTGGGGG GGGCCAACCC TTTTTTCCGA CCGGCACCGT
CACCTGCTCC GCGGAATAGA ACGGGCCGAC TCGGTTACCA TTGACGGGCA CAAACAGCTC
TATGTGCCGA TGGGGGCGGG GATGGTCGTC TTCAAGGATC CCACCGCCCT CTCGGCTATC
GAGCATCATG CCAACTATAT CCTGCGTCAT GGCTCCAAGG ACCTGGGCAG TCATACCCTG
GAAGGGTCGC GGCCAGGGAA GGCGATGCTG GTTCATGCCG GGTTTTCGAT CATTGGCCGC
AAGGGGTACG AGCTTCTTAT CGATATGGGG ATCGAGCGGG CACGCACCTT TGCCGACATG
ATCCAGCGCC ATCCCGATTT CGAGCTGATC AGCGAACCGG AACTGAATAT TCTCACCTAC
CGCTACTGTC CGCCTGCCAT CCAGCAGGCC CTGACCGACG CGACGGCCCA ACAGCGCGCC
GCAATCAATG GACTTCTTGA TCAGGTCTGT CAGCTGTTGC AGAAATATCA GCGCGAAGCG
GGTAAAACCT TTGTCTCTCG AACACGGCTG CATGTGGCTC GCCACGACAT GGAGCTCACG
GTCTTACGTG TCGTTCTGGC CAATCCGCTG ACGACCGATG AGATTCTGGA GGCAGTTTTG
GCGGAACAAT GCGAAATCGT GCGTCTGCCG GAGATTCAGG CCTTGCTGCG GCAGGCTGAG
GAACTCTGTC CCGGTCTGGC GAAAGCTGTC TAA
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| Protein sequence | MPKNRDAARA SLENLYRIFT VPEAPDSTLG AIDQAIAGDV AGFLQTHIVA IERPLEEIEA
DFSSFSIPEE PTYVSEYTEF VKENLVAHSV HTASPAFVGH MTSALPYFML PLARLMTALN
QNVVKVETSK AFTPMERQVL AMLHHLVYGR NDDFYPQWIH NSQHALGAFC SGGTLANVTA
LWVARNRLFA PDGEFRGIAQ EGLARALKHR GADGIAVLVS ERGHYSLGKA ADLLGIGRDD
LIKIKTDANN RIDLKALREE CRRLQDRNTL PLALVGIAGT TETGNVDPLE AMADLAQELG
CHFHVDAAWG GPTLFSDRHR HLLRGIERAD SVTIDGHKQL YVPMGAGMVV FKDPTALSAI
EHHANYILRH GSKDLGSHTL EGSRPGKAML VHAGFSIIGR KGYELLIDMG IERARTFADM
IQRHPDFELI SEPELNILTY RYCPPAIQQA LTDATAQQRA AINGLLDQVC QLLQKYQREA
GKTFVSRTRL HVARHDMELT VLRVVLANPL TTDEILEAVL AEQCEIVRLP EIQALLRQAE
ELCPGLAKAV
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