Gene Gmet_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1340 
Symbol 
ID3738480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1498389 
End bp1498799 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content51% 
IMG OID637778621 
ProductPilT protein-like 
Protein accessionYP_384300 
Protein GI78222553 
COG category[R] General function prediction only 
COG ID[COG5611] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0194017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAAG GGAGTGAATC GGTGATCGCT GTCGATACGA ATATCCTGGT GCGTTACGTA 
ACTAATGACG ATCCGCTCCA GGCAAGGCGA GCGCTCGCTA TTCTTGCAAG ACAAGAAGAT
ATCTTCATTC CCAAAACGGT CCTTCTGGAG ACGGAGTGGG TGTTGCGTGC TGTCTATGAA
TTGCCGGTTG AGTCTATCCT GAAAGCGCTT CTCCATATTC TCGGACTCCC TAACGTTGTC
GCGGAAAATC CGGAAGAGGT GTCACTGGCT CTTGATTATT ACAGCCGGCG GCTTGACTTC
GCTGATGCCC TGCATCTTGC GTCCAGTTGT CATGCTGATT CTTTTTTCAG CTTTGATGCT
GCATTTGTCA AAAGGGGGAA AAAGATTGGT GCCCGGGTGG AGAAGGGGTA G
 
Protein sequence
MAEGSESVIA VDTNILVRYV TNDDPLQARR ALAILARQED IFIPKTVLLE TEWVLRAVYE 
LPVESILKAL LHILGLPNVV AENPEEVSLA LDYYSRRLDF ADALHLASSC HADSFFSFDA
AFVKRGKKIG ARVEKG