Gene Gmet_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1339 
Symbol 
ID3738479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1498144 
End bp1498413 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content55% 
IMG OID637778620 
ProductAbrB family transcriptional regulator 
Protein accessionYP_384299 
Protein GI78222552 
COG category 
COG ID 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0175317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA GTAAACTGTC CAGCAAGGGA CAGATAATTA TTCCAAAACA GGTGCGAGAG 
GCCCATCATT GGCAGACCGG TATGGAGTTC GTTATAGAGA GCGTAGGCGA CGGCATCCTT
CTCAGGCCGC GCAAACCGTT TCCTCCTACT CGACTTGAGG ATGGCCTCGG CTGTGCGGGC
TACAGTGGGC CTGCCAAGAC TCTGGCGGAA ATGGAGCAGG GCATCCTCGA AGATCTGAAG
CGGAAGTGGC TGAAGGGAGT GAATCGGTGA
 
Protein sequence
METSKLSSKG QIIIPKQVRE AHHWQTGMEF VIESVGDGIL LRPRKPFPPT RLEDGLGCAG 
YSGPAKTLAE MEQGILEDLK RKWLKGVNR