| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1272 |
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| Symbol | |
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| ID | 3739771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1433225 |
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| End bp | 1434268 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637778552 |
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| Product | virulence factor MCE-like protein-related protein |
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| Protein accession | YP_384233 |
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| Protein GI | 78222486 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.821992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000000117847 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTATTG AAAAAAAGGT CGGATTTTTC TTTATAGCCG GACTTGTGCT TCTCGGGGTG
ATGCTGGAGC TTGGGGAGAA ATGGAATCCC TTTCAAAAGG CCATTCCGTA CAAAACCTAC
CTTTCAAGCA CCACAGGTCT CAAGTTGGGC GATCCGGTCC GGCTAGCGGG AGTGGAGGTC
GGCAAGATCA CGAAAATTGC CATTGCCGAC AGCCGGGTTG AAGTGGCTTT CGAGGTGAAG
CCCGGTACTG CCATCAAAGC CGATTCGGTG GCAACCATCC GGCTCACCAA CCTCCTCGGA
GGTCAGTTCC TCGGTCTCTC CTTCGGGTCG CCCGACGCAC CGGTGCTACC GCCCGGCAGT
GCGGTCAAGA GCCGTGAGAC CGCCAATATC GACGTCATCG TGGATAACGT AGGTGACCTC
GCCAAGGACG CAAAAGTCTT GATCAAGGAC CTGACCGTCA ATCAGAAGGA GGTGTTTCAG
AAGGTCTCCT CCATGCTTGA CGAAAACCGG GGGAACCTGC GGGGCGCCAT CGAAAACATG
AACAGTATCA CCACCAAGAT GGACCGGGGA CAAGGATCGC TGGCCCTCCT TCTCAACGAC
AAATCCCTCT ACCGCAACAC CAACGAGCTG GCGGCGAGCA TGAAGAACGT CACCGCGAAG
ATCGAGAAGG GGGAGGGGAG CCTCGGCAAG TTCGTCAACG ACGATGCCTT CTACCGTGAT
GCCAAGGGGG CCGTGGCGAA TCTGAACGAC GGAGCCAAGG ACATCAAGGA GATTGCCGCC
AAGATCAACC GGGGTGAGGG GAGTGTTGGC AAGCTCGTGA ACGACGAGAG CCTCTACAAT
GAGCTCCGGG ACGCTTCAAA GAACGTCGGA GAGGTCGCCA AAAAAATCAA CAATGGGCAA
GGTACCCTCG GCAAGCTCGT GAATGACGAT ACCCTGTACC GCGACACCAC GGCAGCCATG
AAGAAGCTGG ACAAGGCGAC CGAGGGGCTG TCCGACACGG GCCCCATTTC AGTCATCGGA
AGCATGGTGG GGACGTTGTT CTAG
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| Protein sequence | MSIEKKVGFF FIAGLVLLGV MLELGEKWNP FQKAIPYKTY LSSTTGLKLG DPVRLAGVEV
GKITKIAIAD SRVEVAFEVK PGTAIKADSV ATIRLTNLLG GQFLGLSFGS PDAPVLPPGS
AVKSRETANI DVIVDNVGDL AKDAKVLIKD LTVNQKEVFQ KVSSMLDENR GNLRGAIENM
NSITTKMDRG QGSLALLLND KSLYRNTNEL AASMKNVTAK IEKGEGSLGK FVNDDAFYRD
AKGAVANLND GAKDIKEIAA KINRGEGSVG KLVNDESLYN ELRDASKNVG EVAKKINNGQ
GTLGKLVNDD TLYRDTTAAM KKLDKATEGL SDTGPISVIG SMVGTLF
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