| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0861 |
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| Symbol | |
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| ID | 3738738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 949510 |
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| End bp | 951438 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637778139 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_383828 |
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| Protein GI | 78222081 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAA AGAAGGTCGG AGAGATACTT GTTGAAAATC GGCTGATTAC CGAAGATCAG
CTGCGGGAGG CCCTGGAACT TCAGAAGGTC TTCCCCGATC AGCCCGTGGG GCAGCTCCTC
TGCAAGCTCG GCTTCCTTAC CGAAAGCGAT CTCTCCTACA TCCTTGAACA GACCGGCAAG
CGCCAGAAGC TTGGCGATAT CCTCGTGCGT GAGCGGCTCA TCGACCAGGA ACGTCTTGGC
CAGGCCCGCG AGGTCGCCAA GCGGGACGGC ATCCCCCTCG CCAGGGCTCT GCGCAAGCTT
CGCGTTGTGG AGGAGGAACC CCTCGCCAAG GCGGTGGCCG TCCAGTACGA TCTGTCTTTC
GTGCACATCA ATACCCTTGA GATTGAAGCG GAGCTTGCCC GCTACATCAA CCCCTCCTAT
GCCCAGAAGC AGCGGATTGT CCCCATCTCC AAGATTGGCA ATACCCTGAC CCTGGCCATG
GCCTATCCGA TAAGACTCCA GGAGCTGAAG GATCTCGAGC AGAGCATCCG TTCGCGGATT
ATTCCCGTTA TCGCCGTGGA GAGTGAAATC CTCAAGGCCC AACAGCGCCT CTACCGGACC
GCTGCCAGTT CTGTTGCCAC CTTCGATGAG GCTGACCTTG AGATCGGTCC GGGAAGCATC
TCGGAAATCC TGGGGGCCAA TGCCGACGAT GAACCCGACA TCGAGGACGA GGTCAAGAAG
GTATCCGAGC GTGACAGCAT TATTGTGAAG CTCGTCAACA AGATCATCTT CGACGCCCAC
CAGAGCCGTG CCTCCGACAT TCATATCGAG CCGTACCACG GCAAGAACGA TATTGTTGTC
CGGATGCGGG TGGACGGTCG GTGCAAGGTC TACCAGCGCA TCCCCTACCG CTATAAGTAC
GCGATCCCCT CCCGCCTCAA GATCATGGCC GAGCTCGACA TTGCCGAAAA ACGCAAGCCC
CAGGACGGAA AGATCAATTT CAAGAAGTTC GGTCCCCTCG ACATGGAGCT TCGCATCGCC
ACCATGCCTA CCGCCGGCGG GTTGGAGGAT GTGGTGATCC GGCTTGTTAA TACCGGCGAG
ACCTTTTCCT TTGATAAACT GGGCCTGACC GAACGGAACA TGCGCATCTT CAGCGAGGCC
GTAAGCAAGC CCTACGGCCT GGTTCTCGTG GTGGGCCCCA CGGGGAGCGG CAAGACCACC
ACGCTCCACG CGGCGATTTC CCGGATAAAC AGTCCCGAGG TGAAGATCTG GACCGCCGAG
GACCCGGTGG AGATCACTCA GAAGGGACTG CGGCAGGTGC AGGTCAACCC CCGGATTGGC
CTCACCTTCC CGGCGGCGCT TCGTTCGTTC CTGCGGCTCG ACCCCGATGT CATCATGGTG
GGGGAAATGC GGGACGAGGA AACCGCTTCC ATCGCCGTGG AGGCTTCCCT GACCGGACAC
CTGGTCCTTT CCACACTCCA TACCAACTCG GCCCCCGAAA CCGTGACCCG CCTTTTGGAG
ATCGGGCTTG ATCCGTTCAG CTTCTCCGAT TCGCTTATCT GTATCGTTGC CCAGCGCCTG
GCCCGGCGTC TCTGCGAGGA GTGCCGCGAG GTCTACCGTC CTGACAGGCA GGAGCTTGCA
GAGATCATCG CGGAGTACGG CGAGGAGCAG TTCGCCGCCA CCGGCCTCGT GGGAAACGAA
CTCGTCCTTG CCCGGGCAGT GGGGTGCCCT TCCTGTGGCC AGACCGGCTA CCGCGGCCGC
CTCGGTATCC ACGAGGTGCT CGAATGTACG GATGGTCTGA AAAGCCTGAT AAAAAAGCGG
TCTGAAACCG AACTTATCCG CCGCCTGGCC ATGGACGAAG GGATGACGAC CCTTCGTCAG
GACGGCATAC TTAAGGTCTT ACAGGGCCTC ACCGACATCC ACGAGGTCCG CAAGGTTTGT
CTGAAATGA
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| Protein sequence | MSVKKVGEIL VENRLITEDQ LREALELQKV FPDQPVGQLL CKLGFLTESD LSYILEQTGK
RQKLGDILVR ERLIDQERLG QAREVAKRDG IPLARALRKL RVVEEEPLAK AVAVQYDLSF
VHINTLEIEA ELARYINPSY AQKQRIVPIS KIGNTLTLAM AYPIRLQELK DLEQSIRSRI
IPVIAVESEI LKAQQRLYRT AASSVATFDE ADLEIGPGSI SEILGANADD EPDIEDEVKK
VSERDSIIVK LVNKIIFDAH QSRASDIHIE PYHGKNDIVV RMRVDGRCKV YQRIPYRYKY
AIPSRLKIMA ELDIAEKRKP QDGKINFKKF GPLDMELRIA TMPTAGGLED VVIRLVNTGE
TFSFDKLGLT ERNMRIFSEA VSKPYGLVLV VGPTGSGKTT TLHAAISRIN SPEVKIWTAE
DPVEITQKGL RQVQVNPRIG LTFPAALRSF LRLDPDVIMV GEMRDEETAS IAVEASLTGH
LVLSTLHTNS APETVTRLLE IGLDPFSFSD SLICIVAQRL ARRLCEECRE VYRPDRQELA
EIIAEYGEEQ FAATGLVGNE LVLARAVGCP SCGQTGYRGR LGIHEVLECT DGLKSLIKKR
SETELIRRLA MDEGMTTLRQ DGILKVLQGL TDIHEVRKVC LK
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