Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0471 |
Symbol | |
ID | 3739838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 518299 |
End bp | 519606 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637777745 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_383439 |
Protein GI | 78221692 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC AGATCGAAAT CGCCCGCGAA GGGACCATTT CTTCCCAGAT GATGGCCGTG GCAGCCGAAG AGCACGTTTC CCCCGACTAT GTCCGGCAGA TGGTCGCCGA AGGGAAGATC GTCATCCCCG GCAACCACAG CCGCAAGCCC CGGGCCGTCG GCATCGGCAA GGGACTGCGC ACCAAGGTGA ACGCCTCCAT CGGTACCTCC TCCGACATCA TCGACTATGG GGCCGAGGTG CGGAAGGCCC TGGCCGCCCA GGAGGCGGGG GCCGACACCC TCATGGAGCT CTCCGTGGGG GGCGATCTGG ACCGGGTGCG GCGGGAGGTG ATCGCCGCCG TGGATCTCCC CGTGGGGAAC GTCCCCCTCT ACCAGGCCTT CTGCGAGGCG GCCCGCAAGT ACGGTGATCC CAATAAACTG GATCCGGAGA TGCTCTTCGA CCTGATCGAA AAGCAGTGCG AGGACGGCAT GGCCTTCATG GCGGTCCACT GCGGCATCAA CCTCTATACC ATCGAGCGCC TGAAGCGGCA GGGGTACCGC TACGGCGGCC TCGTCTCCAA GGGGGGGGTC AGCATGGTGG CCTGGATGAT GGCCAACAGG CGGGAAAATC CCCTCTACGA GCAATTCGAC CGGGTAACTT CGATCCTCAG GAAATACGAC ACGGTCCTCT CGCTGGGGAA CGGGCTGCGG GCTGGCGCCA TCCACGACTC CTCGGACCGG GCCCAGATCC AGGAGCTCCT CATTAACTGC GAGCTGGCTG AACTGGGGCG CGAGATGGGG TGCCAGATGC TCGTGGAGGG GCCGGGGCAC GTGCCGCTCG ACGAGGTGGA GGGGAACATC CAGCTCCAGA AGCGGATGAG CGGCGGCGCC CCCTACTACA TGCTGGGTCC CATCTCCACC GACGTGGCCC CCGGCTTCGA CCACATCACC GCCGCCATCG GCGCGGCCCA GTCCTCCCGC TACGGCGCCG ACCTCATCTG CTACATCACT CCGGCCGAGC ACCTGGCCCT CCCCAACGAG GAGGATGTCC GCCAGGGGGT GAAGGCAGCG AAGATCGCGG CCTACATCGG CGACATGAAC AAGTACCCGG AACGGGGCCG GGAGCGGGAC AAGGAGATGT CCAAGGCCCG CCGCGACCTG GATTGGAAGA AGCAGTTCGA GCTGGCCCTC TTCCCGGAGG ATGCCAAAGC CATCCGTGCC AGCCGCACCC CCGAGGACGA GGCCACCTGC ACCATGTGCG GCGACTTCTG CGCCTCGCGC GGGGCGGGGA AGCTTTTTGC GGCGGATCTG CGGGGGGATA AGATTTAA
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Protein sequence | MKTQIEIARE GTISSQMMAV AAEEHVSPDY VRQMVAEGKI VIPGNHSRKP RAVGIGKGLR TKVNASIGTS SDIIDYGAEV RKALAAQEAG ADTLMELSVG GDLDRVRREV IAAVDLPVGN VPLYQAFCEA ARKYGDPNKL DPEMLFDLIE KQCEDGMAFM AVHCGINLYT IERLKRQGYR YGGLVSKGGV SMVAWMMANR RENPLYEQFD RVTSILRKYD TVLSLGNGLR AGAIHDSSDR AQIQELLINC ELAELGREMG CQMLVEGPGH VPLDEVEGNI QLQKRMSGGA PYYMLGPIST DVAPGFDHIT AAIGAAQSSR YGADLICYIT PAEHLALPNE EDVRQGVKAA KIAAYIGDMN KYPERGRERD KEMSKARRDL DWKKQFELAL FPEDAKAIRA SRTPEDEATC TMCGDFCASR GAGKLFAADL RGDKI
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