| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0415 |
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| Symbol | |
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| ID | 3738170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 459049 |
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| End bp | 460932 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637777689 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_383383 |
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| Protein GI | 78221636 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes
[COG1589] Cell division septal protein |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTG ATGAACTGAA AACCAAGAAG ATCGGCGTGC TTATGGGGGG GCTCTCGGCG
GAACGGGAGA TCTCTCTCTC CAGCGGAGGA GCGGTGCACA AGGCGCTTCT GGCCCGGGGA
TATGACGCCG TTGCCATTGA CGTGGACCGC GATCTGCCCC AGGTCCTTGT CAGAGAGTGG
ATCGACGTGG CCTTCATCTG CCTCCACGGC CGCTACGGCG AAGACGGGGC GGTCCAGGGG
GTGCTGGAAC TCATGGGAAT CCCCTACACC GGCTCGGGGG TCCTTGCGAG CGCCCTGGCC
ATGAACAAGA TTTTCGCCAA GCAGGCCTTT GCCGCCGCAG GCCTCACGAT AACCCCCCAC
CGGGTGCTCG TGCGGGGCGA AACCTTCGAC GCCGTTGCGG CCGGCATTGA TCTTCCCGTA
GTGGTGAAGC CCTCCCAGGA GGGGTCGTCG GTGGGGGTAA GCATCGTGAA GAAGGCGGAG
GAGCTTGCCG CCGCTCTGGA GGCCGCGTTC CGCTACGACA ACGAAATCCT CGTGGAGAAG
TTCGTCAAGG GGCGGGAGAT TCAAGTAGGG ATTCTCGACG ACCGGGCCAT GGGAGCCATC
GAGATTGTGC CGAAGAAGGA GTTCTACGAC TTCGAGGCCA AATACACCGA CGGCATGGCG
GAGCACATCT GTCCGCCGGT TCTTCCCGCC GACCTGTACC GCAAGCTCCT CGCCGAAGGG
GAGAAGGCCC ATCGGGCTTT GGGGTGCGCC GGGTACAGCC GGGTAGACTT CCTGGTGACC
GAGGGGGGTG ACTGTTTTCT CCTCGAAGTG AATACCCTGC CGGGGATGAC GGCCCTGAGC
CTCCTGCCGG AGATCGCCCA GAAGGAGGCG GGGATCGCTT TCGAGGAGCT GGTGGAGCGG
ATACTGGTTT CAGCTTCGCT GAAGATTCAG GGACCGGGGA CCGGGGACCG GGTTCAAAAG
AACACTAGGA ATCACAGGGG GAACGCTGGG CGTGGAGCTG GTTGTTTGTT TTTGCCGGTC
CCTGGTCCCT GGTCCCCGAT CACCGATTTT ATGCGCGATT TACACGTAAA AACACGAATC
CAGCCGGCCA ACAAGAGCCG CAACCGGGTA AAGAAAGAGC GGAAGCCGAT CAACTGGCGT
CCCCTCATCA CCTGGGGGAG CCGGGCTGTG CTCGGCGCGT TGGCCGTGGC GGTCGTGGGG
GGCGCAGGCT ACAAGGGGTA CGCGTTCGCC TCCCGGTACG AGATTGCGGT ACTGCAGGTG
GAGGCCATCG AGGTGTCGAA GTTGAGGCAC CTGACTCGTG ACGAAGTTCT TGGACAGGCC
GGGGTGAGAA GGGGCGATTC CATGCTGGGG CTGCGGTTAC GCCGCATCGG CGAACAACTG
GCCAAGAACC CCTGGATCGA GAAGGTGCAG GTGCGCCGCT ACTTCCCCCA CACCATCCGC
ATCGAGGTGG TGGAGCGGGA ACCGGTGGCT GTGGTGAACA TGGGGTTTCT CTATTACCTG
GATGCCAAGG GGGAGGTCTT TAAGCCCCTT ACCCAGGGTG ACAGCCTCAA TTTTCCGGTC
ATAACCGGCA TCACCGAGGA TGATCTGGCC CGGGATCCCA AGGGGGCCAG GGAGATGCTC
ACCGGCGCCG TGGCCCTCAT GGATATGCTG AAGAAGGGGC GCGCCTTTAC CCTGGCCGAT
GTTTCGGAGG TTCACATCGA CAAGGGATTC GGCCTCACTC TCTTCACCGC CGGTGGAGGC
GTGCCGGTAC GGCTCGGCAA GGATGGGTAC GAGACCAAAC TGGCCCGTTT TGCCACGGTC
TACGGGGAAC TAAAGACGCA GATGACGGCA GTTGAGTACA TCGATTGCGA CTACCAGGAC
AAGATCATCG TCAAAAAAGG ATAA
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| Protein sequence | MTRDELKTKK IGVLMGGLSA EREISLSSGG AVHKALLARG YDAVAIDVDR DLPQVLVREW
IDVAFICLHG RYGEDGAVQG VLELMGIPYT GSGVLASALA MNKIFAKQAF AAAGLTITPH
RVLVRGETFD AVAAGIDLPV VVKPSQEGSS VGVSIVKKAE ELAAALEAAF RYDNEILVEK
FVKGREIQVG ILDDRAMGAI EIVPKKEFYD FEAKYTDGMA EHICPPVLPA DLYRKLLAEG
EKAHRALGCA GYSRVDFLVT EGGDCFLLEV NTLPGMTALS LLPEIAQKEA GIAFEELVER
ILVSASLKIQ GPGTGDRVQK NTRNHRGNAG RGAGCLFLPV PGPWSPITDF MRDLHVKTRI
QPANKSRNRV KKERKPINWR PLITWGSRAV LGALAVAVVG GAGYKGYAFA SRYEIAVLQV
EAIEVSKLRH LTRDEVLGQA GVRRGDSMLG LRLRRIGEQL AKNPWIEKVQ VRRYFPHTIR
IEVVEREPVA VVNMGFLYYL DAKGEVFKPL TQGDSLNFPV ITGITEDDLA RDPKGAREML
TGAVALMDML KKGRAFTLAD VSEVHIDKGF GLTLFTAGGG VPVRLGKDGY ETKLARFATV
YGELKTQMTA VEYIDCDYQD KIIVKKG
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