| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0408 |
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| Symbol | |
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| ID | 3738163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 450650 |
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| End bp | 452062 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637777682 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_383376 |
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| Protein GI | 78221629 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTATTCT CTCTGGCAGA CATACGTGAG GCAACGGGAG GCACCCTCGG CGGCGAAGGG
AAAACTGCCG GTGTGGAGGG GGTGTCAACC GACTCCCGAA CGGTTCAGCC CGGCGAGCTG
TTCGTGCCGT TGCGAGGTGA ACGGTTTGAC GGCCACGATT ACCTCGGCGC TGCATGCGAT
CGCGGGGTAC AGGTTGTGCT TGCGGAGCAC CAGTGGCTGG AGAAGAACGA ACTTCCGCCC
GGTGTCTCCG CCGTCGCCGT CGACGATACC CTGGAGGCCC TTGGCGATTT GGCCTGTTTT
CATCGGCAGC GCTTTGCCAT TCCAGTGGTG GCCGTGACCG GGAGCAACGG CAAGACAACC
ACCAAGGAGA TGCTGGCCGC CATCCTGGGG CAGACCGGCC CCGGGCTCAA GACAGAGGGG
AACCTCAACA ACCTGATCGG GCTTCCCCAG ATGCTTCTTC GCCTCGATAA CTCCCATCGT
TGGGCTGTCC TGGAGATGGG GATGAGCGCC TTTGGCGAGA TCGACCGTCT GGCTGAGATT
GCCCGTCCGG ATGTGGGGAT CATCACCAAC GCCTATCCAG CCCACCTGGA GACCCTGGGA
AGTGTCGAAG GGGTGGCACG GGCCAAAGGA GAGCTCTTCC TGCGGCTCCC TGCAGAGGGG
TGCGCCGTGT TCAACGCCGA CGATCCCCTC ATCGCCCGTT GTCCCTCCCC CGACGGAGTT
CGTCGTGTTT CCTTCGGGCT CCACAACGCC GATGTCACTG CCGAGGCGGT CGAGAATCTT
GGGCGCAATG GCCAGCGTTT CATTCTCCGG CTTTCCACGG AATCGGTTCC GGTCACCCTG
CGGGCCTTCG GCCGTCACAA TATCGCCAAT GCCCTTGCCG CTGCCGCGGC TGCCCATGTC
CTTGGTGTTC CCACCGAGAC CATCGCCCGG GGTCTGGGAG AATTTTCACC CTATGCCAGG
AGGTTCAATC TGGAGGAGGT GGGGGACGTC ATCCTCATCG ACGACAGCTA CAATGCTAAC
CCCGCCTCCA TGGCGGCAGC TCTCACCACT CTGCGGGAAA TCCGCGCAGG ACGCAGGGCG
GTGGCGGTTC TTGGCGACAT GCTCGAACTG GGCGAAGGGG CCGAGGAGGC CCACCGACAG
CTGGGACTTC TGGCAGCCAC CTGCGTCGAT CGTCTCTACG TGATGGGGGG AATGGCCGGC
ATTGTTGCTG CTGGGGCACT CGAGGGAGGG CTTGCGGACG ATGCAGTTAC GGTTGCCACG
AGCCATGACG CCATTGTGGC GGACCTGCGG CGAACCACCG CGGCGGGCGA TTTCATTCTT
GTGAAAGGAT CCCGGGGATT GGCCATGGAT CGGGTCGCGG AAAAGATGCG TGAAGTCTTT
GTCGCGTCCC TCGGGAAGGG GGCCTCGGCC TAA
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| Protein sequence | MLFSLADIRE ATGGTLGGEG KTAGVEGVST DSRTVQPGEL FVPLRGERFD GHDYLGAACD
RGVQVVLAEH QWLEKNELPP GVSAVAVDDT LEALGDLACF HRQRFAIPVV AVTGSNGKTT
TKEMLAAILG QTGPGLKTEG NLNNLIGLPQ MLLRLDNSHR WAVLEMGMSA FGEIDRLAEI
ARPDVGIITN AYPAHLETLG SVEGVARAKG ELFLRLPAEG CAVFNADDPL IARCPSPDGV
RRVSFGLHNA DVTAEAVENL GRNGQRFILR LSTESVPVTL RAFGRHNIAN ALAAAAAAHV
LGVPTETIAR GLGEFSPYAR RFNLEEVGDV ILIDDSYNAN PASMAAALTT LREIRAGRRA
VAVLGDMLEL GEGAEEAHRQ LGLLAATCVD RLYVMGGMAG IVAAGALEGG LADDAVTVAT
SHDAIVADLR RTTAAGDFIL VKGSRGLAMD RVAEKMREVF VASLGKGASA
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