Gene Gmet_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0393 
Symbol 
ID3739371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp434854 
End bp435390 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID637777666 
Productcolicin V production protein 
Protein accessionYP_383361 
Protein GI78221614 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCC TCGATATACT GCTCTGGGCC GTTTTGCTGG GGTTTGCGGC AAAGGGGTTC 
ATGAAGGGTT TTGTCCGCGA GGTCTGCTCA CTCCTCGGGT TGGTGACCGG AGGGTGGGCG
GCCTTTACCT ATTACCAGGC CGCTGGCGCG TTCCTGGGGA ATCTTATTCA TCTTCCCCCC
CGGGTGGCGT CCGCAGTGGC GTTCCTCTGC ATCCTCCTGG CGATCGGCCT CCTCTTCTTT
CTCGTCGGAC ACCTTCTCAC CGTAATCTTG AAAATTGTCC TCCTCGGAGG GGTCAACCGC
GTCGGGGGAA TTGTCTTCGG CCTTTTGCAG GGAGGGCTTC TTCTCAGTAT TGTCCTTTAT
CTGGCCAGTT CCCCTTCCGT TCCCCAGGGG GTACGGGGCA GGATAGCCGC ATCCGGCTCT
GCCCGGGCCC TCGCCGACTG CGGGAAGGAC ATTGTGACTG GTTGGCGAAA AAATGCTGTT
GAGAAACGGC CTGCCGGAGA AAATCGGACT AAAGATGTCA CTGATCCCCG ACGATAA
 
Protein sequence
MSLLDILLWA VLLGFAAKGF MKGFVREVCS LLGLVTGGWA AFTYYQAAGA FLGNLIHLPP 
RVASAVAFLC ILLAIGLLFF LVGHLLTVIL KIVLLGGVNR VGGIVFGLLQ GGLLLSIVLY
LASSPSVPQG VRGRIAASGS ARALADCGKD IVTGWRKNAV EKRPAGENRT KDVTDPRR