| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0117 |
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| Symbol | |
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| ID | 3738024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 142993 |
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| End bp | 144084 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637777396 |
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| Product | hydrogenase formation HypD protein |
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| Protein accession | YP_383091 |
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| Protein GI | 78221344 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0182713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATACC AGGACGAATT CCGCGACCGC CACGTGGTGC TGGGCCTTGC CGCCCGGATC
AGGGAGCACG TGGCCGGGCG TACGGAGCCC ATGACCTTCA TGGAGGTCTG CGGCACTCAT
ACCATGTCGA TCTATCAGTA CGGGCTCCGC ACCCTCCTCC CTCCCCAGGT GCGGCTCATC
TCCGGACCCG GCTGCCCGGT CTGCGTCACC CCCAATGAGT ACCTGGACCG GGCCGTGGCC
CTCTGCCGGC TCCCCGACGT TATCGTCGCC ACCTTCGGCG ACATGGTCCG GGTCCCCGGC
TCCACGTCGT CCCTCCAGGA GGAGCGCGCC CGGGGGGCCG ACATCCGGAT CGTCTACTCC
CCCTTGGACG CCGTTGCCAT TGCTGCCAGG AATCCGGAGA AGCGGGTGGT CTTTCTCGGC
GTCGGCTTCG AGACCACGGC CCCGGCCATT GGCGGGAGCA TCCTGGCGGC GAAGAAGCAG
GGGCTCGCCA ACTACTTCGT GCTGGCAGCC CACAAGACCA TGCCCAAGCC CATGGGGGTC
CTCTCCGCCG ACCCGGAGCT GAAGATCGAC GGCTACATCT GCCCCGCCCA CGTGAGCACC
ATCACCGGGC CGGAGATCTA CCGCTTCCTG GCCGAGGAGT TTCATATCCC CTGCGTCATC
ACCGGTTTCG AGCCTGCGGA CGTCATGCAG GGGGTCGAGA TGCTCGTCCG CCAGGTGGTG
GCGGGGGAGA GCCGGGTGGA GACCCAGTAC AGCAGGGTGG TACGGCCTGA GGGGAACCGC
AAGGCCCAGG AGGTGATCCG GGAGGTCTTC ACCCCCTGCG ATGCCCCCTG GCGCGGCATC
GGGGTCATCC CGGGGAGCGG CCTGCGGATC GCCGACGCCT ATGCCGTGTT TGACGCCGAG
AAGGCGATTC CCGTGGCGGT GGAGGAGACC CGGGAACACG CGGGATGTCT CTGCGGCGAG
ATCCTCAAGG GGAAAGCGGC CCCAACCGAC TGTCCCCTCT TTGGCGGCGC CTGCACCCCC
GAGTCCCCCG TGGGGGCCTG CATGGTCTCC TCCGAGGGGA CCTGCGCGGC GGCGTACAAG
TATGGGCAGT GA
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| Protein sequence | MKYQDEFRDR HVVLGLAARI REHVAGRTEP MTFMEVCGTH TMSIYQYGLR TLLPPQVRLI
SGPGCPVCVT PNEYLDRAVA LCRLPDVIVA TFGDMVRVPG STSSLQEERA RGADIRIVYS
PLDAVAIAAR NPEKRVVFLG VGFETTAPAI GGSILAAKKQ GLANYFVLAA HKTMPKPMGV
LSADPELKID GYICPAHVST ITGPEIYRFL AEEFHIPCVI TGFEPADVMQ GVEMLVRQVV
AGESRVETQY SRVVRPEGNR KAQEVIREVF TPCDAPWRGI GVIPGSGLRI ADAYAVFDAE
KAIPVAVEET REHAGCLCGE ILKGKAAPTD CPLFGGACTP ESPVGACMVS SEGTCAAAYK
YGQ
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