| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3637 |
|---|
| Symbol | |
|---|
| ID | 6369471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 3909687 |
|---|
| End bp | 3910730 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642679052 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_001953857 |
|---|
| Protein GI | 189426680 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAG AGCGACAGAC GCCGGACCGG TCCGAGGCAC TTGAACTGCT GCTGCATGGC
GATCTGCTGC AGCTTGGGCG TTGGGCAGAC GCTATCCGCT GCAGGCTGCA CCCGGATAAA
CAGGTTACCT TTGTGGTGGA CCGTAACGTC AACTATACCA ATGTCTGTGA ATCGCGCTGT
TCATTCTGTG CGTTCTACCG GGATCTTGAC GCACCTGATG CCTATCTGCT GGAGCATGAA
AGCATTTTTG CCAAGATCGC TGAGCTTGTG GAACATGGCG GCACGCAACT GCTGATGCAG
GGCGGCCTGC ATCCGGGCCT CACCATTACC TACTTTGAGG AGCTGTTTGG CGAGATTCGG
AGACGTTTTC CAACAGTACA AAATCATTCG CTGTCTCCCG CTGAAATCTG CCACCTGGCA
GACCGCCATG GCCTTACGGT TATGCAGGTA CTTACACGTT TGCAGGCAGC CGGTCTGACT
TCGGTACCAG GTGGTGGCGC AGAGATCCTG GTGGATGAGG TACGACAGGC CATCTCGCCG
AAAAAGATCG GCTGGAAGCG CTGGGGAGAA GTAATGCTGG CTGCAGCCTC ACTGGGTATG
ACCACCACCG CCACCATGAT GTTCGGCAGC ACAGAGACAC CGGAACAGAT TGTGGAACAT
ATCTTCAGGG TACGGGAGTT ACAGGCTTCG GGAGGCTCGT TCACAGCGTT CATACCATGG
ACGTACCAGC CCGGAAACAC CGAGTTGGGA GGTTCTACAG CCACAGGAGT TGAGTACCTG
AAAGTGCTCG CGTTATCCAG AATTGTACTT GACAACATTC CGAATATTCA GGCCAGCTGG
GTGACTCAAG GGGCAAAGCT GGCTCAGGTA GCGCTGTTTT TTGGCGCCAA CGATCTTGGT
GGTACCATGC TGGAAGAGAA TGTGGTTGCT GCGGCTGGCT GTTGTTTCAG GATGTCACAA
CAGGAGATGA TTGAGCTGAT TCAGACTGCA GGCTTTAGTG CTGCTCAGCG CAGCACCGGC
TATGCCATCC TGAGGCAGTA CTGA
|
|---|
| Protein sequence | MIGERQTPDR SEALELLLHG DLLQLGRWAD AIRCRLHPDK QVTFVVDRNV NYTNVCESRC
SFCAFYRDLD APDAYLLEHE SIFAKIAELV EHGGTQLLMQ GGLHPGLTIT YFEELFGEIR
RRFPTVQNHS LSPAEICHLA DRHGLTVMQV LTRLQAAGLT SVPGGGAEIL VDEVRQAISP
KKIGWKRWGE VMLAAASLGM TTTATMMFGS TETPEQIVEH IFRVRELQAS GGSFTAFIPW
TYQPGNTELG GSTATGVEYL KVLALSRIVL DNIPNIQASW VTQGAKLAQV ALFFGANDLG
GTMLEENVVA AAGCCFRMSQ QEMIELIQTA GFSAAQRSTG YAILRQY
|
|---|
| |