Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_3543 |
Symbol | |
ID | 6369314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 3812663 |
End bp | 3813874 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642678958 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_001953764 |
Protein GI | 189426587 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00838652 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACTCT TTCTTGATCT GTTCGAACGC CTCGGCCTGT TTGCCATCCT GTTCATATTC CTGATCCGTT TCAAGGCCTT TAAACGTCTG CTGACCGGCA TCGCCAGCAG GAGGGACAAG CTGGTGCTGG CGTTCATGTT CGGCGGGGCC GGCATCATGG CCACCTACAG CGGCTTTGCC TTTCACGGCG CCATAGCCAA CCTGCGCGGG GTGGCGGTGG CCCTGGCCGG TATCCTGGGC GGACCGCTGG TCGGTCTGGC GGCCGGACTG GTGGCGGGCA TCCACCGCTA TGCCATTGAT CCTGCCGGAC TGACCTCCCT TTCCTGCGGC ATCGCCACGG TCCTGCAGGG GGTGGTGGCG GCCTGGCTCT ATCCCCGCCT GCGCCGGGTC GAATACGACA TCTTTGCCGC CTTTGCAGTG GGTGCTGTCA ATGAGATCCT GAAGATGACG CTGATCCTGC TGCTGGCCAA ACCGTTCTCC TCGGCCCTGC ACCTTGTGAC GGTGCTGGCC TTTCCCTCGA TCCTGGTCAA CGGACTTGGC AACGCCGTCT TTGTCCAGCT GATCTCCACC GTCTTCCGTG AGCAACAGCT GGCCAAGGCG GAGATCCGGG CATTGCAGGC CCAGATCAAC CCCCATTTCC TCTTCAATGC CATCTCCACC ATCATCAGCT ATACCCGCAC CGACCCGGCC ATCGCCACCA ATCTGCTGGT AAAACTTGCA GAGTTCTTCC GCAACAGCAC CGCCACCACC GAGCGCGAGG TGCCGCTCTC GGTTGAGCTG CAACACTGCG AGGCCTATCT GGCGATTGAG CAGGCCCGTT TTGAGGAGCG GGTCCGGATA CACTACCAGA TCGATGAGGA CGCCCTGGAC TGCCCGGTGC CACCCTTGAT CCTGCAACCG CTGGTGGAAA ACGGCATCCG CCACGGTATC CTGCCGCGGG ATGCAGGCGG GGATATCACG ATCCAGGCCC GCAAAGAGCA GCAGAACCTG CATATCAGGG TTGCGGACAA CGGGGTCGGC ATGGACCAGG CCAAGCTGTC CGGCCTGTTG ACAACCCGGC AGCATCCCAC CGGCAAAGAG GGGCTGGGGA TTGCCCTGAA AAACGTCAAT GCCCGCCTGG TGGCACTCTA TGGCCGCAAA CGGGCCCTCA GGATCGAGAG CAGCCCCGGC GCCGGCACAA CCATCTCCTT TTCCATCCCG GTGACCGCAT GA
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Protein sequence | MGLFLDLFER LGLFAILFIF LIRFKAFKRL LTGIASRRDK LVLAFMFGGA GIMATYSGFA FHGAIANLRG VAVALAGILG GPLVGLAAGL VAGIHRYAID PAGLTSLSCG IATVLQGVVA AWLYPRLRRV EYDIFAAFAV GAVNEILKMT LILLLAKPFS SALHLVTVLA FPSILVNGLG NAVFVQLIST VFREQQLAKA EIRALQAQIN PHFLFNAIST IISYTRTDPA IATNLLVKLA EFFRNSTATT EREVPLSVEL QHCEAYLAIE QARFEERVRI HYQIDEDALD CPVPPLILQP LVENGIRHGI LPRDAGGDIT IQARKEQQNL HIRVADNGVG MDQAKLSGLL TTRQHPTGKE GLGIALKNVN ARLVALYGRK RALRIESSPG AGTTISFSIP VTA
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