| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3505 |
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| Symbol | |
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| ID | 6367707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 3764497 |
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| End bp | 3766191 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642678922 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD |
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| Protein accession | YP_001953728 |
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| Protein GI | 189426551 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0823042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC CCCCCAGCCC TGAAGCCTGG CTGCGCCAGC AGGCCCGCAC GGTCAAAGGC
AGCATGCTGG CGGCCATCCT GGCGGCCTTT GGCGGTGGTC TGCTGATCAT CCTGCAGGCA
CGCCTGTTGG CCCTGGTCTG CCAGCGGGTG GTGATTGAGG GGATCGGGCT GGCACCGCTG
CTGCCGTTAC TGGCCTGGGT GGGGGCGGTG GCCCTGTTGC GTGGCCTGGC CGCCTACCTG
AGCGAACATG CGGCCATCAA GGCAGCAGCC CAGGTCAGGC AACAGGTCCG CACCGCCCTG
TACCAGCGCT TGTTGCTGCT GCGCCCGACC GGCCTGTCCG GAGAGGTAGG GCCGTTGACC
GAGGCGGTCA CTGCCGGGAT CGAGGGGCTT GAGGCCTACA TTGCCCGCTT CCTGCCCCAG
ATGGTGTTGG CCGGACTGCT GCCGCTGGCA GTGCTGCTGG TGGTGCTGCC ATCAGAGTGG
CGCTCGTCAC TGGTGCTGAT CTTCTCCGCA CCGTTTATCC CGCTCTTGAT GGTCCTGATC
GGCAAGGGGA CCGAGACCCT CAACCGCCGC CAGTTCAGCC GGCTTTCCCG CATGGCAGGC
CATCTGCTGG ACCTGGTGCA GGGGCTGCCG GACCTGAAGA TCTTTGGCGC CGCCAAACGG
GAGGCCGAGC TGGTGGCGCT GGTTTCTGAC CAGTACCGCA CCGGCACCAT GGCCGTGCTA
CGGGTGGCCT TTCTGTCCGC CTTTACCCTG GAGTTTTTCT CAACCGTGGG CACGGCGGTG
GTGGCAGTCA TCATCGGCTT CCGCCTGCTG GCCGGAAACC TGTCGCTGCT GGACGGCCTG
TTTGTGCTGC TGCTGGCCCC GGAGTACTAC CTGCCGCTGC GCAATCTGGG GCTGGCCTAC
CACAGCCGGA TGAACGGCAT GGCCGCTGCC GAGCGGATCA TACCGCTGTT GCAACAACCG
CTGCCGGATG CTGCAGGCGG CCAGTTGGTT GTACCGTTCA GGGCACCGGA AATCAGCTGT
GATTCCGTCA GTTTTCGTTA CGGCGGCCAG CGGGGCGGCG TGCAGGAGGT CTCGCTGACC
ATCCCTGCCA ACAGCATAAC CGCCCTGGCC GGTGCCAGCG GCAGCGGCAA ATCAACCCTG
GCACGTCTGT TGCTGGGGCT GGCCCGGCCG GAGTCCGGCC AGATCCTGGT AAACAGCGTT
GACCTGGCAC AACTGGATCA GGCTGCCTGG CGGTCGCAAC TGGCCTGGGT GCCGCAGCAG
CCGTTCTTCT TCAGCGCCAC GATCCGGGAG AACCTGCTGC TGGGCAGACC CAATGCTGAT
CAGCAGGCAA TCCAGCAGGC CCTTGCGGCA GCAGCTTTAA CAGACGTGAT CAAGGCACTG
CCGGAAGGGC TGGCTACCCG GCTGGGTGAT CGCGGGGCTG GGCTGTCCGG CGGCGAACTG
CGACGACTGG CCCTGGCACG GGTCTTTCTG CGGGATGCCG GGCTGGTGGT GCTGGATGAG
CCCACTGCCG GGCTGGATAC TGAGAACGAA CAGCTGGTGC TGAATGCCGT TGAACAGCTG
GCAGCTGGCC GGACCGTGCT GATCATCAGC CACCGTGAGG CCACCATCAG CCGCTGCCAA
CAGATTGTAG TGCTGGCCGC AGGCAGGCTG GAGCAGGTCA CCACCTCTCA GGAGTATCTG
GAGGTGACCC CGTGA
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| Protein sequence | MTIPPSPEAW LRQQARTVKG SMLAAILAAF GGGLLIILQA RLLALVCQRV VIEGIGLAPL
LPLLAWVGAV ALLRGLAAYL SEHAAIKAAA QVRQQVRTAL YQRLLLLRPT GLSGEVGPLT
EAVTAGIEGL EAYIARFLPQ MVLAGLLPLA VLLVVLPSEW RSSLVLIFSA PFIPLLMVLI
GKGTETLNRR QFSRLSRMAG HLLDLVQGLP DLKIFGAAKR EAELVALVSD QYRTGTMAVL
RVAFLSAFTL EFFSTVGTAV VAVIIGFRLL AGNLSLLDGL FVLLLAPEYY LPLRNLGLAY
HSRMNGMAAA ERIIPLLQQP LPDAAGGQLV VPFRAPEISC DSVSFRYGGQ RGGVQEVSLT
IPANSITALA GASGSGKSTL ARLLLGLARP ESGQILVNSV DLAQLDQAAW RSQLAWVPQQ
PFFFSATIRE NLLLGRPNAD QQAIQQALAA AALTDVIKAL PEGLATRLGD RGAGLSGGEL
RRLALARVFL RDAGLVVLDE PTAGLDTENE QLVLNAVEQL AAGRTVLIIS HREATISRCQ
QIVVLAAGRL EQVTTSQEYL EVTP
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