| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3449 |
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| Symbol | |
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| ID | 6368999 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3709693 |
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| End bp | 3713291 |
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| Gene Length | 3599 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | 642923353 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGGCCC GGCGCCACCT TAACAGAGTA ATCGTATTCT TGGCAGGTAT TGCTGCGCTC
TTGGCCGCTT TGCTGCCGCC GGTCGGCTAC TGGGGGTTGG CAAGCCGTTA TCAGCAGGGG
ATGTTGTCTG CTGTGGCAGA GCTTGAGGCA GAGCATGTTG CTGGTCTGGT GATCACGGCT
CCTGATCTCT GGAAGTATCA GCAAATCAGG CTTGATGAGC TGCTTGAGCG TCGTCCCGGC
ATGGGAAATA CCCAGTTGCG CAGGATTGTG GATTTGGAGG GGCAAGTGAT TGCTGAAAAA
GGCGATCACC CTCAATGGCC GAGCATCAAG GGTACTTTTT TGATACATGA TGCAGGTGTT
CCGGTGGCAA GGATCGAGAT TGTTCAGTCC TTGCGTCCAA TCATTTTCCG ATAACGTAAA
ATAAATTTCG CTTTTTTAAA AAGAGTCACA GCAGTGCCTG ATTTTGGTTA GAATTTAAGT
CGCCAAACAC AAATTCGACC GAAAAGGAGA ACACTGCTGT GGACGATCAT TCTACTAAAA
AGGCACAAAT AATCCAGCTC AATGAGAGCG CCGTACGGGA CCACCTCGGG GAAATGGTCA
GAAACACCGT TGAGGATACC CTCAACAGCA TGCTGGATTC TGAAGCTGAT CGTTTGTGCA
ATGCCGAGAA GTACCAGCGT CATGATGCCA GAACCGACAC CCGTGCCGGT CATTACCAGC
GCAAGCTCAT GACCAAAGCC GGAGAAGTGA ATCTCAACAT TCCGAAGCTT AGACGCCAGA
CCTTTGAAAC GGCCATCATT GAACGTTATC GTCGTCGTGA AGCATCTGTC GAAGAATCGC
TGATCGAGAT GTACCTGGCC GGTGTATCGG TACGCAGGAT AGAAGACATC ACCGAAACCC
TGTGGGGCAC CAAGGTAAGC CCCGGTACTA TCAGTAACCT CAACAAAAAG GTCTACGCCA
AGATTGAAGA ATGGCGCAAT CGCCCGATTA TCGGCAACCA TCCCTACGTC TACCTGGATG
GTATTGTTCT GAAGCGTTCC TGGGGCGGAG AGGTATGCAA CGTATCAGTA CTGGTTGCCA
TCGGCGTCAA CGAGTATGGC TACCGCAAGA TTCTCGGAGT CTGTGAAGGA GCCAAGGAAG
ACAAGGCAGG CTGGTCAAGC TTCCTGCACC ACCTGAAACA GCGCGGCCTG AGCGGTGTCC
GACTCTTCAT TACCGATGCC TGTATGGGGC TGGTGGAGTC ACTGGCTGAG TATTACCCTG
AGAGCAAATG GCAACGCTGC ATTGTTCATT TCTACCGGAA CGTCTTCAGT GTGGTACCGC
GCAAGAAGAT GCCAGAGGTG GCTGCCATGC TCAAGGCGAT TCATGCCTCA GAAGACAAAC
AGGCTGCCAT AGAAAAAGCC GGTACGGTCT TCACCAAGCT GGAAGAGATG AAGCTCAGGG
AGGCAGCAAA GAAGGTGCAG GACTCAATCA GTGAAACCCT GACCTACTTT GACTTTCCAC
GAGAACACCG AATCCGGATC AGAACCAACA ACGCACTTGA GCGGATCATG AAAGAAATCA
GGAGACGAAC CAGAGTAGTC GGTGCATTTC CTGATGGTCA CTCAGCCTTA ATGCTCTGTG
CTGCCAGACT ACGACATATT GCAGGCACCC AATGGGGCTC GAAACGCTAT CTGAATATTG
ATCTTCTCAA AGAACAGGAA CTCGAACTGC AACTGCAAAT AAATGAGGCG GCTTAATAAC
CAAAAGGCAC TGCAAAACAA AAAAGCGAAA AAATCTTTAC ACTACCCATT TTCCGGGCCT
TGGGAGTCTT GCTGTGCAGC ACCGGCATTG CCGTCTTTGT GTTTCGTACC ACCCTGGTTC
TGCCGACACG GGCGGTGGCC GCGGCCCAGC GCTCTCTTGC CGAGAGTGAG CAGAAATATC
GCGGTCTCTT TCTGAGTACA CACGAAGCGG TTCTTTTGCT TGAGCTTGTC CTGAATGATA
CTGACGCAAC GATTGTAGAG GCAAACCCGG CCTGCAGCAG GCTGTTTTTG AAAAACCGGT
CCAGCCTGGT GGGACTGCGC TCTGGGGAGA TGTTTGGTCT GTTGCACGAA GAGATGCTGG
GGCTTTTCCG TCAGGTGCTG CAGGATGGGA GAACCGTTTC CCTTGAAAAA GAGCTGCCGG
GTCTGGATAA AGTGCTCGCC ATTTCGATTC TTCCGGCCGA GGCCCGGCGG GTGGTGGTCA
TATTCTCTGA TGTTACCGAG TACCGTGCCG CAGAACGTCA GGTGCAGCAA TTGGCGTCGT
TTGACTTTCT GACAGGGCTT CCCAACCGGG CACTGCTTAA TGATCGCCTG AAACAGGCAA
TGCTGGCCTG CAGTCGCCGT GAATGCAAGG TTGCTGTCTT TTTTCTTGAT CTTGACCATT
TTAAGGCCGT GAACGACAGC CTCGGGCATG GAGTCGGTGA CCTGCTGTTA CAGGCTGTTG
CCGAACGTCT TGAAAGCGGT ATGCGTCAAT CCGACACCAT TGCCCGGACA GGTGGTGATG
AGTTTGTCAT TGTAACCATG GGGCTGCACG ATGAGCTGAA CGCCTCCCTG GTCGCTGCCG
CCATTCTCAG GTCTCTGGAT GAACCGTTCT GGATTGGAAA TCGAGAAATC TTTGTCAGCG
GCAGCCTTGG CATATCAATT TACCCTGATG ATGCAGAGGA TGCGAGTGAG TTGCTGAAAA
ATGCCGATAT GGCTATGTAC GTAGCAAAAG AACAGGGCCG CAACCGCTAT CACTACTATT
CGAAACAGTT GCAGGAACGG GCGATTGAAC GTCTGGAAAT AGAAACCGCC CTGCGGCATG
CCGTGGCTGA CAACCTGCTT TCGCTGGCCT ATCAGCCCCA GTTTGATGCC CGCACCGGAA
CGGTCATCGG CATTGAGGCA TTGCTGCGCT GGAACAACCC AGATGGGACG CCCTGCCTGT
CGCCCTTGCA GATTATCAGC ATTGCCGAGA AAAACGGTCT GATCATACCG ATCGGCGAGT
GGGGCCTGCA GACGGCCTGC CGGCAGCTGC GCCAATGGAA ATTTGATGGC CTGCAGCCCC
CCCGACTTGC CATTAACCTC TCTGCCGTTC AGTTTGAACA GGCCGGCCTG CTACAGGTGG
TTGCAGGGGC TTTGCAGCAG AATGATCTGT CCCCTGACAG TATCGAACTT GAGTTGACTG
AGAGCGCAAT CATGCACCGC CCGGACGAGG CTGCCAAAAA GCTGCAGGAG TTGAAACAGC
TGGGGGTTTG GCTGGCTGTA GATGATTTTG GTACCGGCTA TTCCTCATTA AGTTATCTCA
AACACTTTCC GATCGATCGT ATCAAGATTG ACCGCTCGTT TGTGTCTGAG GCCCCTGCGA
ATCATGACGA TGCCGCGATT GTCGAGACCA TCATCTCGTT GGCCCGCACT ATGCGGATGG
AGGTGATTGC CGAAGGGGTC GAGCATCAGG GACATGTGGA GTTCCTGCTG GCCAGGGGGT
GTCACGAGAT GCAGGGCTAC TATTATGCGC GTCCCTTGTC GGCTGAACAA TGTGCAAAAC
TGCTGATTCC CGGTTTTGTC ACTGAAAAAT GGCATGCACT ATTGTCGATG CCATCCTGA
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| Protein sequence | |
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