| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_3326 |
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| Symbol | |
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| ID | 6365893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 3558794 |
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| End bp | 3561601 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642678746 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_001953552 |
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| Protein GI | 189426375 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACAGG ATGAGTCGCT GCAGGCGTTA CGCGTAAAGA TTGATGGCTA TGGTAAGGAA
AACCAGACTG AGCTGCTCTA TGTGCTGGCC GAAGGGGTCA GACTGATTTC GGGCGTTGAT
CTGGTCAGGA TCTATCTTGA AGACCTGATC TCAGGTGCAT TGACCTGTGC CTTTGCCAGC
GGTCCTGATG GGGCTGAACT GCGTGAGGTG GCTTTTCCTA TTATTACGCA AGACGCCGTG
GTATCACGGG TTTTTGTCAG TCAGTACCCC GCTGACTTCC GTAGCGGTGA CGGTGCAGCC
GGAACGCTTG ATGGTGCGGT TGCCGGTCGC TTCAATATCG CGTCCAGCAG TTATCTGCCC
CTTGTCAGTC GTGGCCGCTC CATCGGCGTG CTGTGCATTG ACAGCAGGCA TGGCGATTTG
GCGCTGTCCG GCAAGGTCAA GTCCCGCCTG GCAGAATTCA TCCTGCAGCT GGCGGAACGG
CTGGATGAGG CACGCAGCTA CCATCAGCAG GTGCAGCTGG CCCGCCGGCT TGAGGAATCA
AAAAAACGGG AGGCTGCTGG GCAGATGGTT CGCTCAGCAG TGCGCCTGGT GGAAAAGGTG
GCCCTGGCCT CGGTGCTGAC CCCATTGGTT TCCAGTGACG GTTCTGCTGC GCTTGAGGTG
CTGGCCAGCT ATGCCGAAGA TCCTGCCCTG CAGATGCAGT ATGACCGTCT GGGTGCGATC
CTGCTGGAGC CCGGTGCATC GCTAATCTCC CGCTATGTGG ATGTGCAGGC CATCATCAGA
GATGACAGGC TACTTAAGCC GCTCTTTATC AATGACCTGG CCCGCCATGA TCTGCAGAAG
CGTGAGCTGA CCGAACAGAT GTCGCTGCGT AGCCTCTATG TGGTACCGCG TTTTGATCCC
CACAGCCACC GGGTGATCTG TCTGGTCAAT TATTTCTGTC GAGAAGAATA TCGTTTTTCA
GAGTTTGAGA TGGGGCTTTT GCAGGGGCAT GCCGAGATGC TTGCCAGCGT GGTCAGCGGC
GTCGGTGGCG AGCACCTGGA GATCCGGGTG TTGTCCGAGA TCACCGACCT GCTGAATCAA
GGAGATGCCA CCCTGCAGCC GTTTTTGACC AAGGTGCTGG CCAAGGCCAC TGAGCTGATC
GGTGCCGATA CCGGTAGCAT TGCCCTGGTT GAAGAACGGG ATGGCCGGCG CTGGCTGGTG
GTGGAGGATG AGCAAGGGAC GCTTGTCGGA GCCAAAAATA AGGAGTGGCT GAAGCGTTAC
ATCCCTCCTT TTCTTGTGGG GGGTGGGGAG CTAGCCCCTG AAGAACGCAG CCTGACCGGC
TATGTGGCCT GGAGCCAGCA GCCCAAGATT ATCGGCAGTG TGGATGAAGA GCGGACCGGT
GAGGGATTTC ACCGCTCCAT GAGCGATCTG CTGAAGAGTG AGATTGCGGT GCCGGTGGTC
TGTGATGGTG AGGTGATTGC GGTTATCTGC CTTAACTCGT TGCGTTACAG CTATTTTACC
GAGGAACACC GTCGCATCCT GCAGATTATC GGGTCTTTGA CGGCCCGCCA TCTCTCTGAT
CTGCAGCGGA TCGAGGGACT GCAGGGGGAA GTGCAGCGTC TGACCACCGA TGTCGGCTAC
AAGGATCCTC ATGTCTCTTC CTACCGCCTG GGAAACATCA TCGGGGTCAG TCCCACCTCC
CAGGCGGTGA TTGATTTTAT CAATACGGTA TCACAGCCGC TCTTTAACCG GGTTACGCTC
TGGAGCAAAA ATGTGATGCA GGAGGCCACC ATCGGTCTGC CGTCGATTCT GATTACCGGA
CCGACCGGTT CAGGCAAGGA GTTTTTTTTC AACAACCTCT ATAACACACT CAACTCGCTA
TACCGGCTGC AACTGAATCC TCAGGGCGAG TTGCCGGTAA AAAAGACCAA TATCGCTGCC
TATAGTGGTG AGCTGACCTA TTCAGAGCTG TTTGGGCACA AAAAGGGGGC TTTTACCGGT
GCCTCCAGTG ACCGGCGCGG TATCCTGGAA GAGTGTATGG GCGGGGTGGT CTTTCTGGAT
GAGATCGGTG ATGCCGACCC CAAAACCCAG GTACAACTGC TGCGCTTTCT GGATAACGGC
GGGTTTGTCC GGTTGGGGGA GAACATGGAA CGTTTCAGCC GGGTGTTGCT GGTGGCAGCC
ACCAACAGGG ATCTGCCGGC CGAGATTGCA GCAGGCCGTT TCAGGGAGGA TCTTTATCAC
CGTCTGGCAG AGCTCTCGAT CCGCCTGCCG TCCCTGAATG AGCGGCGGGA GGATATTCCC
GACCTGGCGG TGCATTTTCT GGGCAAGCTC TACCGCACCT ACCGGGGCCA GAACGACCCT
GATGATCCGC CGGTATTGGC GGCAGACGCC AAATCAGAGC TGGTACTGCA CCAGTATGAG
GGGAACATCC GGGAGCTGCG TTCAATCCTG CTGCGGGCGA TGTTCTTCAG GCGGGGGAAT
GTGATCGGCG GGGAATCGAT CCGGCAGGCA ATCAAGGGAG TCGGACTGGG CAGTGTTACC
TCGGCCGGTG ATGGCCGGGA GTTGGCAAGC CATCTGGCTG ATACGATTAT TGAGAAGATC
CGCCAGGGGG GCAACTTCTG GCAGGATCTC TACGAACCGT TTACCCGCAA TGATATCTCT
CGTGATGTGG TCAGGCTGGT GGTGGAGAAG AGTCGCGCCT TTGCAGGTCG GCCACTGCCG
GCAGTGGCGC GGAATCTGAG AGCCTTGACT GACGGCATGA GCGATGATGA GCAGCGTAAG
GCGCTGTATA AGTTTAAGAA TTTCCTCTAC AAGACGGTGC GTTTGTAG
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| Protein sequence | MPQDESLQAL RVKIDGYGKE NQTELLYVLA EGVRLISGVD LVRIYLEDLI SGALTCAFAS
GPDGAELREV AFPIITQDAV VSRVFVSQYP ADFRSGDGAA GTLDGAVAGR FNIASSSYLP
LVSRGRSIGV LCIDSRHGDL ALSGKVKSRL AEFILQLAER LDEARSYHQQ VQLARRLEES
KKREAAGQMV RSAVRLVEKV ALASVLTPLV SSDGSAALEV LASYAEDPAL QMQYDRLGAI
LLEPGASLIS RYVDVQAIIR DDRLLKPLFI NDLARHDLQK RELTEQMSLR SLYVVPRFDP
HSHRVICLVN YFCREEYRFS EFEMGLLQGH AEMLASVVSG VGGEHLEIRV LSEITDLLNQ
GDATLQPFLT KVLAKATELI GADTGSIALV EERDGRRWLV VEDEQGTLVG AKNKEWLKRY
IPPFLVGGGE LAPEERSLTG YVAWSQQPKI IGSVDEERTG EGFHRSMSDL LKSEIAVPVV
CDGEVIAVIC LNSLRYSYFT EEHRRILQII GSLTARHLSD LQRIEGLQGE VQRLTTDVGY
KDPHVSSYRL GNIIGVSPTS QAVIDFINTV SQPLFNRVTL WSKNVMQEAT IGLPSILITG
PTGSGKEFFF NNLYNTLNSL YRLQLNPQGE LPVKKTNIAA YSGELTYSEL FGHKKGAFTG
ASSDRRGILE ECMGGVVFLD EIGDADPKTQ VQLLRFLDNG GFVRLGENME RFSRVLLVAA
TNRDLPAEIA AGRFREDLYH RLAELSIRLP SLNERREDIP DLAVHFLGKL YRTYRGQNDP
DDPPVLAADA KSELVLHQYE GNIRELRSIL LRAMFFRRGN VIGGESIRQA IKGVGLGSVT
SAGDGRELAS HLADTIIEKI RQGGNFWQDL YEPFTRNDIS RDVVRLVVEK SRAFAGRPLP
AVARNLRALT DGMSDDEQRK ALYKFKNFLY KTVRL
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