| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2951 |
|---|
| Symbol | |
|---|
| ID | 6367581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 3164560 |
|---|
| End bp | 3165306 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642678364 |
|---|
| Product | outer membrane assembly lipoprotein YfiO |
|---|
| Protein accession | YP_001953178 |
|---|
| Protein GI | 189426001 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4105] DNA uptake lipoprotein |
|---|
| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0644109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TTCGATACCG TTTACTGGTC GCCGGTACCG CCCTGCTGAT GCTGCAGGGT
TGCGCCAGCG CCCCCAAGAC CGATCCGACA CCGGAAGAAC TCTACGCCCA GGGCGAAACC
GCCTTCCAGA AAAGCCGCTA CGAACAGGCG GTTGAGAGCT GGAAAAAGGT CAAGGAGACC
TTTCCTGAAC CGGAACTGGC CGCCAGGGCG GAAATCGGTA TCGCCAACGC CTACTTCCTG
AACCACGACT TTATTGAAGC AGGCGCTGCC TACGAAGACT TCCGCAAGCT GCACCCGACC
CACGAACTGG CCCAGTTTTC GCTCTACCGC CAGGGGCTTG CCAGCTTCAA CCTGATCACC
GGTATCGACA CCGACCAGAC CCCGACAAAA AATGCCCTGG CCCTGTTTGA AAGCTTTATC
CGTCAGTATC CCAAGTCACA ATATGTCGCC AAGGTACAGG AGAAGATTGC CGACTGCCGC
GGCAAACTGG CCCAGTACGA GATCTATGTC GGTCGTTTTT ACTATCGTAC CGACAACTAT
CAGGCTGCCA TCGGCCGCTT TGAGGGGGCA TTGACAAACT TTCCCGATTA TACCGGCAAT
GACGAGACCC TCTTCTACCT GGCCAAGGCC TATATTGCAA ACAGACAGTC GGACAAGGCC
CAGACGGTTC TCAGCCGCCT GATCCGCGAA TATCCAACCG GCAAATATCT GGATGACGCC
CGTAAGCTGC TGGCCGACAA ATTATGA
|
|---|
| Protein sequence | MKLLRYRLLV AGTALLMLQG CASAPKTDPT PEELYAQGET AFQKSRYEQA VESWKKVKET
FPEPELAARA EIGIANAYFL NHDFIEAGAA YEDFRKLHPT HELAQFSLYR QGLASFNLIT
GIDTDQTPTK NALALFESFI RQYPKSQYVA KVQEKIADCR GKLAQYEIYV GRFYYRTDNY
QAAIGRFEGA LTNFPDYTGN DETLFYLAKA YIANRQSDKA QTVLSRLIRE YPTGKYLDDA
RKLLADKL
|
|---|
| |