| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2530 |
|---|
| Symbol | |
|---|
| ID | 6368346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 2705056 |
|---|
| End bp | 2705586 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642677946 |
|---|
| Product | protein of unknown function UPF0079 |
|---|
| Protein accession | YP_001952764 |
|---|
| Protein GI | 189425587 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0802] Predicted ATPase or kinase |
|---|
| TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000117314 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTGTC CTGCAACGTC GCTGGTGGTT GAAACCGGCT CCCCCGAACA GACCGAGGCA
GTGGGAACCA GTCTGGGCAG GCTGCTTGAG CCAGGTGACG TGGTGACCCT GTCCGGAGAA
CTGGGGGGCG GCAAGACCTG TTTCGTGCGC GGCGTGGTCG CATCGCTGGC GCCTGCCGGC
AAAGAGCTGG TGGCCTCCCC CACCTTTGCC ATCCTCAATG AATATCCGGG GCAGCCGCCG
GTGCTGCACT ACGACTGCTA CCGTCTGCGC GGCAGTGACG ATGCCGTGGA ATTAGGGATT
GAAGAACAGC TCTGCGGAGA CACTGTCTGT CTGATTGAGT GGCCGGAACG GATAGCAGCC
GTCCTGCCGG ATGACCGGCT TGAAGTCCTG TTTGAATATG CCGGTGACAC CCGGCGCTGT
ATCACCTTTT TGTCCCATGG TTGCCGTGGG GCCAAACTGC TGGCGCAGCT TGCTGCCATC
GCTGATTCCT GTAAAAAACC CTTGTCTGAG GAACAGCGTT CTGCTATGTA A
|
|---|
| Protein sequence | MPCPATSLVV ETGSPEQTEA VGTSLGRLLE PGDVVTLSGE LGGGKTCFVR GVVASLAPAG
KELVASPTFA ILNEYPGQPP VLHYDCYRLR GSDDAVELGI EEQLCGDTVC LIEWPERIAA
VLPDDRLEVL FEYAGDTRRC ITFLSHGCRG AKLLAQLAAI ADSCKKPLSE EQRSAM
|
|---|
| |