Gene Glov_2452 details

Gene Information

• Locus tag: Glov_2452
• ID: 6366690
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 2618326
• End bp: 2618856
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642677868
• Product: 16S rRNA processing protein RimM
• Protein accession: YP_001952686
• Protein GI: 189425509
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000919836
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGGTT CCAGCGATAA CCTGATTGCC GTCGGTCGAA TCAGTGGCAC CCATGGCATT 
CGAGGCCAGT TGCGGCTGCA TTCCTACTCC GGCAACCTGG AAAGCCTGCA GGCAGCTAAA 
AACGTACTGA TCCGTTTTCC TGCCGGTGGT ACCCGTCAGA TTCAGCTCAA GAAGGCCGCT 
TATCACAGCG GCAAGTTTCT GCTGACGCTG GAGGGGTTTG ACACCATTGA AAAGGCTCAG 
GAGTTAGCCG GGGCCGAACT GTTGCTGCAG CGTGAACAAC TGCCGCCACC TGACGCCGAC 
GAGTACTACT GGCACGACCT GCTCGGTCTT TCAGTTGTTA CGAATGAAGG TCAGGCACTG 
GGTATCATCA AAGATATTCT GGAAACCGGT GCCAACGATG TCTATCTGGT TCGGGACGAT 
GCAACGAAAC GCGAATACCT GATTCCGGCC ATTGCCAGTG TCATCAGCAG TGTAAACATC 
CACACCGGCA CCATGACCAT CACCCCGCTG GAGGGGCTGC TTGATCTCTG A 

 

Protein sequence

MDGSSDNLIA VGRISGTHGI RGQLRLHSYS GNLESLQAAK NVLIRFPAGG TRQIQLKKAA 
YHSGKFLLTL EGFDTIEKAQ ELAGAELLLQ REQLPPPDAD EYYWHDLLGL SVVTNEGQAL 
GIIKDILETG ANDVYLVRDD ATKREYLIPA IASVISSVNI HTGTMTITPL EGLLDL