| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2383 |
|---|
| Symbol | |
|---|
| ID | 6366498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 2558936 |
|---|
| End bp | 2560171 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642677801 |
|---|
| Product | Na+ dependent nucleoside transporter domain protein |
|---|
| Protein accession | YP_001952619 |
|---|
| Protein GI | 189425442 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1972] Nucleoside permease |
|---|
| TIGRFAM ID | [TIGR00804] nucleoside transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCATG CTGTTGTCGG AATGGTTGTC CTGTTGGGGG TTGCCTGGCT GGTGAGTGAA
AACCGGCGCG TGATCCACTG GCGGCTGATC GTAGCCGGAG TCTCTCTTCA AATTGTCATT
GCCCTGCTGA TGCTGAAGGC CGCGCCGTTC CGCCAGCTGT TTCTGGGGTT AAACGCCATG
GTCGGCGCTC TGGAAACAGC CACACGGGCC GGCACCTCCT TTGTCTTCGG TTACCTGGGG
GGCGGGCCGC TGCCGTTTGT CGAGACAGCG CCGGGCGGCT CTTTTTCCCT TGCCTTTCAG
GCCCTGCCGA TGGTGCTGGT GATCGGTGCC CTGACCGCGT TGTTCTACTA CTGGCGTATC
CTGCCCAAGG TGGTACAGGC CTTTTCATGG CTGCTGCGCA CGACCATGGG GATCGGTGGC
GCGCTGGGGG TGGTGGCCTC CGGCTGCATC TTTCTCGGAA TGATCGAGGC ACCGCTGTTG
ATCCGGCCCT ATCTGGTCCG TATGACCCGC AGTGAGCTGT TTGCCATGAT GGCCACCGGG
CTGTCCTGCA TTGCCGGTAC CATGCTGGTG CTGTACGCCA CGGTGTTGCA GAAGGTCATC
CCTGATGCAC TGGGACATAT CCTGACCGCC TCCATTATCC ATGCTCCTGC CGCACTGGTT
GTTGCCTCCA TCATCGTACC CGAGACCGAA GAGCAGACCC TGGGGGGAGA AATCTCCTCC
TATGATGCCT CAAGCGCCAT GGATGCGCTG ACCAAGGGGA CCTGGGACGG CCTGAAGATC
CTGGTTAATA TTGTGGCGCT CCTGATTGTG TTTGTTGCCC TGGTGAAGCT GGCCAATATC
GGGCTGGGAG AGCTGCCCGA TATTGCCGGT GCCCCGCTGA CCCTGGAACG GATGCTGGGA
CTGCTGCTGG CCCCGGTGGT CTGGTTGATC GGGGTGCCCT GGCAGGAGGC GGTCACCGCC
GGGTCGCTGA TGGGGATCAA GATCGTGCTG AACGAGTTTC TGGCCTATAT CCAGTTTTCC
GGCCTGCCGG AGGCAGCGCT CAGTCCCAAA AGCAGGCTCA TCATGACCTA TGCCATGTGC
AGCTTTGCCA ATCTCGGCAG CCTGGGGATC CTGATCGGCG GACTGGGCAC GCTCTGCCCG
GAGCGCCGCA ATGAGATCGT TGGCCTGGGG CTCAAGGCAT TGCTGGCCGG TGTACTGGCA
TCATTGATGA CCGGCGCCGT GGTGGGGATG CTCTGA
|
|---|
| Protein sequence | MLHAVVGMVV LLGVAWLVSE NRRVIHWRLI VAGVSLQIVI ALLMLKAAPF RQLFLGLNAM
VGALETATRA GTSFVFGYLG GGPLPFVETA PGGSFSLAFQ ALPMVLVIGA LTALFYYWRI
LPKVVQAFSW LLRTTMGIGG ALGVVASGCI FLGMIEAPLL IRPYLVRMTR SELFAMMATG
LSCIAGTMLV LYATVLQKVI PDALGHILTA SIIHAPAALV VASIIVPETE EQTLGGEISS
YDASSAMDAL TKGTWDGLKI LVNIVALLIV FVALVKLANI GLGELPDIAG APLTLERMLG
LLLAPVVWLI GVPWQEAVTA GSLMGIKIVL NEFLAYIQFS GLPEAALSPK SRLIMTYAMC
SFANLGSLGI LIGGLGTLCP ERRNEIVGLG LKALLAGVLA SLMTGAVVGM L
|
|---|
| |