| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1677 |
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| Symbol | |
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| ID | 6368501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 1788392 |
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| End bp | 1789546 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642677081 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_001951913 |
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| Protein GI | 189424736 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000607636 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGGTA TTGATTGTGA AAAAATAGCT CAGTTAGCCC CTTCACCCGC CTACGTGGTT
GATCTGGGCA GGTTGCGCCA CAATTTGGCA ATTCTGGATC AGGTGCAGCA ACGCAGCGGT
GCCAGGATAC TGATGGCATT GAAGGCGTTC TCCATGTGGA GCACCTTCCC ACTGATCAGC
AAGACCCTGC ACGGCGTTTG TGCCAGTTCT CCCTGGGAAG CACGTCTGGG ACGGGAAGAG
TTTGGCCGTG AGGTACACAG CTTTGCTGCT GCCTTCAAGG AAAGCGATGT GGTGGAACTG
CTGAGTATCT CCAATCATCT GGTCTTTAAC TCTTTCAATC AGTTAGAGAG GTTCAGGCCC
TTGTGGGAAA AAGAACAGGG CAGGGTCTCC ATCGGTCTGC GGGTTAATCC CGAGCACTCT
GAAGGTCACA CCGCCATCTA TGATCCCTGC GCCCCCACAT CCAGGCTGGG TATTCCGGTT
GCCGAGTTTG AAGGACGCTC TCTGGCTGGA GTCGAAGGGT TGCACTTCCA TACCCTTTGT
GAACAGCTCT TTGAGCCGCT GGAACGGACT GCCAGGGCGT TTGAAGAGAA GTTTGGCAGG
TATCTGCAAG GGATGAAGTG GCTCAACCTG GGTGGAGGGC ACCATATCAC CCGCGAAGGC
TATGATATTG ACGGGCTGGT GGAACTGGTC ACGTATTTCA AGAATAAGTA TGGGGTGGAG
GTCTATCTGG AACCGGGTGA GGCGATTGCC ATCGGCACCG GTCTGCTGGT CAGCGAAGTG
CTGGATGTGG TGCATAACCA GATGGATATT GCTATTCTTG ATGTCTCGGC CACCTGCCAT
ATGCCGGATA TTCTGGAGAT GCCCTACCGC CCAGACATCA CCGGCGGGTT CAAGGCTGGT
GAGAAACCAT ACACCTATCG CTTGGGTGGT CCTTCCTGTC TGGCCGGTGA CGTGATCGGT
GACTGGTCCT TTGATCAGCC CCTTAAAGCA GGTGACCGGC TGGTGTTTGA AGATATGGCC
CATTACACCA TGGTCAAAAC AACCACCTTT AACGGTATTC ACCATCCCCA TCTCTGCACC
TTTGAGCCGG ATACCGGACA GCTGCAGGTG GTGCGCAGCT TTGGCTATCC TGACTTCAAA
TCAAAGCTTT CCTAA
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| Protein sequence | MTGIDCEKIA QLAPSPAYVV DLGRLRHNLA ILDQVQQRSG ARILMALKAF SMWSTFPLIS
KTLHGVCASS PWEARLGREE FGREVHSFAA AFKESDVVEL LSISNHLVFN SFNQLERFRP
LWEKEQGRVS IGLRVNPEHS EGHTAIYDPC APTSRLGIPV AEFEGRSLAG VEGLHFHTLC
EQLFEPLERT ARAFEEKFGR YLQGMKWLNL GGGHHITREG YDIDGLVELV TYFKNKYGVE
VYLEPGEAIA IGTGLLVSEV LDVVHNQMDI AILDVSATCH MPDILEMPYR PDITGGFKAG
EKPYTYRLGG PSCLAGDVIG DWSFDQPLKA GDRLVFEDMA HYTMVKTTTF NGIHHPHLCT
FEPDTGQLQV VRSFGYPDFK SKLS
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