| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1511 |
|---|
| Symbol | |
|---|
| ID | 6366614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 1581008 |
|---|
| End bp | 1582276 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642676909 |
|---|
| Product | lipopolysaccharide biosynthesis protein |
|---|
| Protein accession | YP_001951747 |
|---|
| Protein GI | 189424570 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAA CTGATCCCCC CCCCAAAAAA AGTATCCATA CTACGCCTTA CCCTGTCGAG
GGCGAAATCA ACCTACTTGA CCTGCTGCTG GTGCTGGCCA AGCGCTGGCG GATGATCATT
GGTGTTCCGT TTGTGGTGGC CGCCATCACC GCCATCATCA CCCTCTTCAT GCCTAACATC
TATACTGCCA AGACCATGAT CATCCCCAGT GAAGACAGCT CAAGCGGTAT GGGTGCGTTG
ATGGCCCAGC TCGGTGGCCT GGTAACCATG GCCGGCGGCC CACTGGGGGG TAAGACCACC
GCAGATCTCT ACGTCACCAT GCTTAAGAGC GAAACCGTTA AAGATCCGAT CATCGATAAA
TTCAAACTGA TGGAAAAATA TGAGGCGAAG CTGCGCAGTA ATGTCTATCT AACCCTTGAT
GGTGCAACTG CCATCAACCT GGGTAAAAAA GATGGCGTCA TCACGGTCAG CTTCAGCGAT
GAAGACCCAA AGTTAGCCGC AGCCATAGCC AACGAGTATG TGGATCAACT GGGCAAATTG
TCAGCACAGC TCAACATGAC CGGTGCCACC AACAACCGAC GTTTCCTTGA AAAGCAGATC
ACCGAAACCA AGGCTGACCT CAGTAAGGCA GAAGAAGAAC TAAAGATATT CCAAAGTAAA
AATAAATCAA TATCAGTCCC TGACCAGGCC AAGGCCACCA TTGAAGGGGT GGCCCAGCTG
CGGGCGCAAC TGGCAGTGAA AGAGGTAGAA CTAGGCACCC TGCAGCGTCA GTTTACCGAC
AACAGCCAAG AGGTTAAAAG TGTCAAGGCG GCAGTGGCGC AGTTGCGTGG TCAAATTGCC
AGCCTAGAGG GCAAGGGAAA CAGCAGCAGT GCCATTCCGC AACTAGGGGC TGTCCCACAA
CTGGGACAGG ACTATCTGCG CCTGATGAGG GAGTTCAAGA TCCAGGAAGC AGTCCTGGAG
ATGCTCACCA AGCAGTATGA GATGGCCCAG GTCTCTGAGG CCAAGGACAC TGCCCCATTC
CAGCTGTTGG AAAAAGCCAA GGTTCCGGAG CGCAAAAGCA AGCCCAAACG TGCTCAGATC
GTGATCTTGG CCGCTTTTGC CACCGGCTTC TTGATGGTGC TGCTGGCGTT TCTACTCAAC
TTTGTGGAGC AGATGCGGCC CGAAGACCGT ACACGTCTGC TAGCGTTGCA AGAGCATTTT
CCCTGGCTAA GCTCCTTGTT CACTGCATTA CAAGCCAGGA TCACCGCTGT AACCCGAAAA
AGGACGTGA
|
|---|
| Protein sequence | MSQTDPPPKK SIHTTPYPVE GEINLLDLLL VLAKRWRMII GVPFVVAAIT AIITLFMPNI
YTAKTMIIPS EDSSSGMGAL MAQLGGLVTM AGGPLGGKTT ADLYVTMLKS ETVKDPIIDK
FKLMEKYEAK LRSNVYLTLD GATAINLGKK DGVITVSFSD EDPKLAAAIA NEYVDQLGKL
SAQLNMTGAT NNRRFLEKQI TETKADLSKA EEELKIFQSK NKSISVPDQA KATIEGVAQL
RAQLAVKEVE LGTLQRQFTD NSQEVKSVKA AVAQLRGQIA SLEGKGNSSS AIPQLGAVPQ
LGQDYLRLMR EFKIQEAVLE MLTKQYEMAQ VSEAKDTAPF QLLEKAKVPE RKSKPKRAQI
VILAAFATGF LMVLLAFLLN FVEQMRPEDR TRLLALQEHF PWLSSLFTAL QARITAVTRK
RT
|
|---|
| |