Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1015 |
Symbol | |
ID | 6369161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 1056306 |
End bp | 1056791 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642676410 |
Product | Colicin V production protein |
Protein accession | YP_001951258 |
Protein GI | 189424081 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.280554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCTGC TCGACATCGC CATCCTGGCC GTGCTGGCAC TTGGCGCCCT GCGAGGGCTG CTGCGCGGCC TGATCAAAGA AGCGGCAGCC CTGACCGCCC TGCTGCTGGG TGGCTGGCTG GCTTTCCGCT ATCACGAAAA GGCGGCCGTA CTGCTGCATG GCATGCTGCC GCCGGTGGCA GCCCGGATGG TCGCATTTAT ACTCCTGCTG ATTCTGGTAG GGCTGGCTGC TCACCTGCTG GGAAATCTCT TGACCGGCCT GGTCAGGCTG GCCCTGCTGG GCTGGGTAAA CCGCCTTGGC GGTATGGTGC TGGGCTGCCT CGAAGGGGCA TTGGTGCTGG GAATGTTTTT TTACGCTGTT GTTGCCGTAC CTTTTTCCTT CCCGTTCAAG GAAACCGTTC AAAAACATCC CTTTGCCCAT CCGCTGGCAA GCTTTGGCGG CTCAACGCTT GATCGGGCCA AGACGCTACG GCAGCAGTCA CCATGA
|
Protein sequence | MSLLDIAILA VLALGALRGL LRGLIKEAAA LTALLLGGWL AFRYHEKAAV LLHGMLPPVA ARMVAFILLL ILVGLAAHLL GNLLTGLVRL ALLGWVNRLG GMVLGCLEGA LVLGMFFYAV VAVPFSFPFK ETVQKHPFAH PLASFGGSTL DRAKTLRQQS P
|
| |