| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0890 |
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| Symbol | |
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| ID | 6369073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 920153 |
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| End bp | 921784 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642676285 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001951133 |
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| Protein GI | 189423956 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGCAC AGGATCTTGA CTTGCGCGAG TTGCTCAGTT TTGCGCCGGG CGGAGGTATT
ATCCGGTTCA TGGGGAAGCG CGCATTGCTG TTTGATGCCG TTGCTCTGGG GCTTTTGCGT
AAAGAACTGA TCGACACCCT GGGCACGACT GCTGCCCGCA GTATTCTGAC CCGCTTCGGC
TATGCCCACG GCCGCAGGAC TGCAGAAGCG CTACGGCAGG AGTTCCCGAG CCTGCTGGAG
GACAGTCAGA CCGGCCCGCG TCTGCATACG TTGCTGGGGC TGGTGGAGGT TGCCAACAGT
ACCCGTACCG AAGGTGTGGA GGGGGTGCCG TTGGTGGAGG GTGACTGGCT CAACTCATAC
GAGGTTGAAC AGCATCTGCT GCATCTCGGC AGATCAACGG AACCTGTCTG CTGGAGTCTG
ACCGGGTTTG CCAGTGGCTA TGTCTCTGCC TGGGCGGGCA AGGAGGTCTA TTTTATCGAG
ACCCGCTGCT GTGCCAAGGG GGATGCCATC TGCCACATGC AGGGGCGTTT CAAGGAGCAA
TGGGGCCCCG AGCTGGATGA GCATCTGCAG TACTACCAGA TGGAATCGGC CGACAATATG
CTGGCCGAGC TGACTGAAAA ACTGCGGACG GTCGAAAACC GGCTCAGGGT CAAGAAACGC
CAGCTTTCCT GCCTGGATGG CGAGGGGGGG GAAGAGGAGT GTGCCTGTAT TACCGCCCGT
AGCCCTGCCA TGCGCAAGAC GATTGAGATG GCCCGCCGGA TTGCCAAGGT GGAATCGACG
GTGGTGATCA GCGGTGAGAG CGGTACCGGC AAGGAGCGGA TCGCCCAACT GATTCATGAG
GGCTCGGCCC GTATGGGGCG ACCCTTTGTG GCGGTTAACT GCGGGGCGGT GACGGAGACC
CTGCTGGAGA GCGAACTGTT CGGCCATGTG CGCGGGTCAT TTACCGGAGC TGCCAAGGAT
GCGGTTGGTC TGTTTGAGGC CGCCAACGGG GGGACGCTTT TTCTGGATGA GATCGGCGAG
ATATCGCCTG GGATGCAGGT CAAGCTGTTG CGGGCGTTGC AGGAGCGGGA GATCAGGCGG
GTTGGCGACA ACAAGGCCCG GCCGGTTGAT ATCAGGGTGG TGGCGGCCAC CAACCGCAAC
TTGGCCGATG AGGTGGCTGC CGGTCGATTC CGCCAGGATC TTTACTACCG TCTGCGGGTG
ATTGAGCTGC GGGTGCCCCC GCTGCGGGAA CGGCGTGAGG ACATCCTGCC CCTGGCACGC
CTCTTTCTGG ATGAATCGGC GCGCCGCTCA AACCGGACCA TTACCGGTTT TGATGCCAAG
GCGGCTGACC AGCTGTTGCG TTATGACTGG CCCGGCAACG TGCGGGAGCT GCAAAATGCC
GTTGACTACG GGGTGGCGCT CTGTACAGGT GATCACGTGC AGGCCGATGA ATTGCCCGAG
GAGTTGCGTG CGGCCGTGTT CAAGCCGACG GTCAACGGCG GGATCAGGCC GCTTGAGGAG
ATGGAGCGGG AGTACATCCT GGCGGCCCTG GATGCCATGG GGGATAACCG GACCCGTACC
GCCAGTGCCT TGAATATCGG CATTGCGACC CTCTACCGCA AATTGAATGA ATACGGCAAA
GGGTTAAAAT AA
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| Protein sequence | MRAQDLDLRE LLSFAPGGGI IRFMGKRALL FDAVALGLLR KELIDTLGTT AARSILTRFG
YAHGRRTAEA LRQEFPSLLE DSQTGPRLHT LLGLVEVANS TRTEGVEGVP LVEGDWLNSY
EVEQHLLHLG RSTEPVCWSL TGFASGYVSA WAGKEVYFIE TRCCAKGDAI CHMQGRFKEQ
WGPELDEHLQ YYQMESADNM LAELTEKLRT VENRLRVKKR QLSCLDGEGG EEECACITAR
SPAMRKTIEM ARRIAKVEST VVISGESGTG KERIAQLIHE GSARMGRPFV AVNCGAVTET
LLESELFGHV RGSFTGAAKD AVGLFEAANG GTLFLDEIGE ISPGMQVKLL RALQEREIRR
VGDNKARPVD IRVVAATNRN LADEVAAGRF RQDLYYRLRV IELRVPPLRE RREDILPLAR
LFLDESARRS NRTITGFDAK AADQLLRYDW PGNVRELQNA VDYGVALCTG DHVQADELPE
ELRAAVFKPT VNGGIRPLEE MEREYILAAL DAMGDNRTRT ASALNIGIAT LYRKLNEYGK
GLK
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