| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0888 |
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| Symbol | |
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| ID | 6368928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | + |
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| Start bp | 916626 |
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| End bp | 918257 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642676283 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001951131 |
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| Protein GI | 189423954 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGGTT TCCGGGGGGT AAGCATGAAG GCAGAAGAAC TAGATCTGAG GCGCATCCTT
TCCTTCAGAC CCAAGGGGGG GACAATACAG TTTATGGGGC ACAGGGCCAT GATTGTCGAT
GCACTGGCAA TGGGGCTTTT GCGTAAAGAA TTGATCGAAA ATCTTGGCAA TTTTGCTGCC
AGAACAATTC TTACCCGTTT TGGCTACGCA CACGGCTGGA GCACTGCTGA CAACCTCTGT
ATCGAATATC CAGATCTTAA AGATGACCCT AAAACGGGGC CAACGTTACA TATGCTGCAG
GGGATTTTGA ATGTGGCAAC AAATGATGTT TTTCATGAGC CGTCTTTTCG AATATCTATT
CGTAGTCAAG AATCCTATGA AGCCGAGCAA CATCTCTTGC ATGTCGGTAT CCCTTCAGAT
CCGGTTTGCT GGACGCTGAC GGGATATATC AGTGGTTACT GCTCACGCAT GCAGGGTGAA
GAAGTTTACT GTATTGAACA TCAGTGCTGT GCCATGGGAG ACGCGATATG TCGCTATGAA
GTACGCACTC GAGAGGATTG GGATGAGGAG ATTGAGCCGC ATTTACCATT TTTTCGTGCA
GATACTATTG ATTCGGTGCT CCATGAGGTG ACTGCAAAAC TTAAAAAAAC CGAACGTGAC
ATCAAAGTGC GAAGATCTCT TATGGATGGA GATCTTGGCT GCTGCGGACT TGCAGCAAAA
AGCAAGACCA TGCGCAAGAC CATAGATCTT GCCAGGAGGA TTGCGAAGGT AGAATCTTCA
GTGGTGATTA CCGGTGAAAG CGGCGTAGGC AAGGAGCGGA TAGCGCGGAT CATCCATAGT
GAATCTTCAC GCGCCTTACG GCCGTTTGTT GCCATCAACT GCAGTGCCGT CACGGAAACC
TTGCTGGAAA GTGAATTTTT CGGGCATGCC CGTGGGGCTT TTACCGGTGC CAACAGAGAC
CGGATCGGTC TGTTTGAGGC CGCGAATGGC GGCACCTTGT TTTTAGACGA AGTGGGCGAG
ATCTCGCCAG GCATGCAGGC CAAGCTGCTG CGTGTCTTGC AAGAAAAGGA GATCAGGCGG
GTTGGTGAAA ACAGCTCACG CCCTGTGGAT GTCCGGATTA TCTCCGCCAC TAACCGGGAT
CTCGGTAATG AGGTCTCGGC GGGCCGTTTT CGAGAAGATC TGTATTACCG GTTGTGTATC
TTTGAGCTGG TTGTGCCGGC CCTACGTGAA CGCCAAGAGG ATATTCTGTT GTTGGCACGT
TGTTTTCTGG ATAAATCGAC ACAGAAAATC GGTAAGGAAA TCATTGGCTT TCAGCCTGAG
GTAACGGATC GCCTGATACA GTATGAATGG CCTGGCAATG TGCGGCAACT AGAGAATACC
ATTGAGCATG CCGTGGTGCT GTGCCAGGGA AAACGGATTG GGCTTGATGA TCTGCCGAAG
GCGGTGCGTT CGGCTCAGGG CGGGGGGAGT GTCGCAAATG CCATCAGAAA GATTGATGAT
CTCGAGCGGG AGCAGATCCT TGCAGCAATC AAACTGCTTG ACGGCGATAA GACTGAGGCT
GCCAAACAGT TGGGAATAAG CCTCTCCTCC CTGTATCAGA AGCTTAAACG ATACCAGACG
TTGCCGGTTT AA
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| Protein sequence | MYGFRGVSMK AEELDLRRIL SFRPKGGTIQ FMGHRAMIVD ALAMGLLRKE LIENLGNFAA
RTILTRFGYA HGWSTADNLC IEYPDLKDDP KTGPTLHMLQ GILNVATNDV FHEPSFRISI
RSQESYEAEQ HLLHVGIPSD PVCWTLTGYI SGYCSRMQGE EVYCIEHQCC AMGDAICRYE
VRTREDWDEE IEPHLPFFRA DTIDSVLHEV TAKLKKTERD IKVRRSLMDG DLGCCGLAAK
SKTMRKTIDL ARRIAKVESS VVITGESGVG KERIARIIHS ESSRALRPFV AINCSAVTET
LLESEFFGHA RGAFTGANRD RIGLFEAANG GTLFLDEVGE ISPGMQAKLL RVLQEKEIRR
VGENSSRPVD VRIISATNRD LGNEVSAGRF REDLYYRLCI FELVVPALRE RQEDILLLAR
CFLDKSTQKI GKEIIGFQPE VTDRLIQYEW PGNVRQLENT IEHAVVLCQG KRIGLDDLPK
AVRSAQGGGS VANAIRKIDD LEREQILAAI KLLDGDKTEA AKQLGISLSS LYQKLKRYQT
LPV
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