| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0788 |
|---|
| Symbol | |
|---|
| ID | 6367197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 810132 |
|---|
| End bp | 810797 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642676185 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001951034 |
|---|
| Protein GI | 189423857 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGA CAGTATTTAT AACTGGTGGT AGTAGAGGTA TTGGCAAAGC GATAGTTGAT
GCATTTTCCA GAAATGGATA TACAATAATA GCGCCAACAA GGGCTGAAAT GGACCTTTCT
TCTGATAGTT CAGTATTGAA TTATTTTGAA CGTAACAAAA TACAAGTTGA TTGTATTGTC
AATAATGCTG GTATAAATCC ACTATCTCAA ATTGAAAATG TAAATGATTG CGATATTGAA
GAAGCTATAA ATATTAATCT TAAAGCACCT ATACTCATTG TGAGATCTCT TGTCTCGAGT
ATGAAAGAAC GGAAATACGG ACATATTGTT AATGTCTCAT CTATTTGGGG AGTAGTTTCA
AAAGAAAAGA GAACAGTTTA TTCAATTACA AAAAATGGCT TACATGGTCT TACCAACACA
CTCGCCGTTG AGCTTGGCGC GTATAACATC CTCGTAAATA CCGTATGTCC AGGTTTCACT
AATACGGAGC TTACTAAAAA GAATGTCTCC ACTGATGAGG CAAAAGCTAT TGCCACAAAT
ATTCCTCTCG GCAGATTTGC AGAGCCTGCT GAAATTGCTT CACTGATATA TTTTCTTGGA
TCTGAACAAA ATTCTTATAT TACGGGTCAG AAAATAGTCA TAGATGGAGG TTTTACAGTA
CTATGA
|
|---|
| Protein sequence | MGKTVFITGG SRGIGKAIVD AFSRNGYTII APTRAEMDLS SDSSVLNYFE RNKIQVDCIV
NNAGINPLSQ IENVNDCDIE EAININLKAP ILIVRSLVSS MKERKYGHIV NVSSIWGVVS
KEKRTVYSIT KNGLHGLTNT LAVELGAYNI LVNTVCPGFT NTELTKKNVS TDEAKAIATN
IPLGRFAEPA EIASLIYFLG SEQNSYITGQ KIVIDGGFTV L
|
|---|
| |