Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0635 |
Symbol | |
ID | 6368410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 633281 |
End bp | 636403 |
Gene Length | 3123 bp |
Protein Length | 1040 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642676026 |
Product | protein of unknown function DUF450 |
Protein accession | YP_001950881 |
Protein GI | 189423704 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTCA GTGAAGATTC GCGTGTCAAA ATCCCCTGCA TCCTGCATCT GGTCCGGCTT GGTTACCAGT ATCTCTCCCT CAAAAATGCC GTATGGGATG AAGAAACCAA TATCTTTCCA GAGTTGTTTC GTCGCTCCAT CGCCCGGATC AATCCCGGCA CTGGCAACGA TGAGATTCAA CGTTTACTGG ATGATGCCAG ACTCTCGTTA GATAACGAAG ATCTGGGCAA AGCCTTCTAT GAGAAACTGA CAGATCGATC AGGCATCAGG CTGATCGATT TTGAGAACTT TACCAACAAC AGCTTTCACG TCGTAACCGA GCTGACCTAC AAAAATGGGG ATGATGAATT CCGGCCCGAC ATTATTCTGC TGATCAACGG TATGCCGTTG GTCTTTATTG AAGTCAAAAA GCCCAACAAC CAGGAAGGTG TCCTGGCTGA GCGCAACCGG ATCATAAAAC GTTGCCAAAA TAAAAAGTTC CGTCGCTTTA TCAATATCAC CCAGTTGATG GTGTTCTCCA ATAACATGGA GTATGACGAC GGTTCATCGC AACCGATTGA AGGGGCTTTC TATGCCAGTC CCTCCTACGA TGAGCCGATC TTTAATTATT TCCGTGAAGA AGAGCTGCTC AGTCTGGAGA CTCTGCTGGC CCCGGAAGAA GACGAGCTTG AAAACGCCGT CCTTAAAGAC AACAACCTGA ACGTGATCAA GCACAGCCCT GAGTTTCTCA GCAACAAATC GCCGGATACA CCAACCAACC GGATCTGCAC CTCCCTGTTT AGCCGGGAGC GTCTGTCGTT TCTGCTGCAA TACGCCTTTG CCTATCTGAA CGAGTCGGAA GGCCTGCACA AGCATGTTAT GCGTTATCCG CAGCTCTTTG CCACCAAGGC GATTGAGACA AAGCTGGATT CCGGTGTCCG CAAAGGGATT ATCTGGCATA CCCAGGGCAG CGGCAAGACC GCGCTGGCCT ACTATAATGT GCGTTTTTTA ACCGATTACT TCCAACGACG CTCCATTATC CCCAAATTTT ACTTCATTGT TGATCGGATA GATCTATTGA TCCAGGCGCA GCGTGAGTTC ACCAGTCGTG GTCTGATTGT GCATACCATT AGCACCCGCG AGGACTTTAG ACGTGACATC AAGACTATCC AGGTGATCCA TAATCACACA GGAAACCCCG AGATAACTGT GGTCAACATT CAGAAGTTTG AAGATGACCC GGGCGTAGTA CGGGTTGAAG ATTACGATAT CAGCATCCAG CGGGTCTATT TTCTTGATGA GGTTCACCGC AGCTACAACC CCAAGGGCAG CTTTCTTGCC AACCTGAGCC AGTCTGACCA GAACGCCATT AAGATCGGTC TGACCGGTAC GCCATTGCTG GGGGACGACT ACAACTCCCG CGCCCTGTTT GGCGACTACA TCCACAAGTA TTACTACAAC GCCTCCATTG CCGACGGCTA TACCCTGCGC CTGATCCGCG AAGAAATTGC CACCAATTAC AAACTTTCCC TGCAGGAGGC GCTGGCTGCT GTAGAACTGC AGCAGGGGGA TCTGGATAAA AAGCTGATTT TTGCCCACCC TCGCTTTGTG GAGCCGATGC TGGACTACAT CATCACTGAC TTTGAAAAGA GCCGGGGGGC GTTGAACGCC CCTGGCATCG GTGCCATGGT GATCTGCGAC AGCGCTGAAC AGGCCCGGCA GATGTTTGAG CAGTTCCAAT CCCGCTTTGC GCCTTCAGAG GTTATTGTGC AGCCCCCCTG CACCAGTGAC AGCTATGCCA CTGACCTGCC TCTGGCTGCC GATCCTGCGC CAACCTACGC AGGGCAGCAG AAACAGGCCA CCAGGGTAAA AACTGCAGCC CTCATCCTGC ATGATGTGGG CAATAAGAAT GAGCGCAAGC AGTGGATGGA GGATTTCAAG GCTGGCAAGA TAGAGATCCT GTTCGTCTAC AACATGCTAC TGACCGGCTT TGATGCCAAG CGCCTGAAAA AACTCTATCT TGGCCGGGTG ATCCGCAAAC ACAACCTGTT GCAGGCCTTA ACGCGTGTCA ACCGTCCCTA TAAAGAGTTC CGCTACGGTT ACGTGGTTGA CTTTGCCGAT ATCCGCAAAG AGTTTGACGC CACCAACAGA GCCTATTTTG AGGAGCTGCA AGATGAGCTG GGGGATGAAC TGGAGCATTA TTCCCACCTG TTCAAGTCTC CAGAAGAGAT CGAACAGGAG ATCGAACAGA TCAAGGACAT CCTGTTCCGT TTTGATACGG AAAATGCCGA GTCATTTTCC CGGCAGATCA GCCAGATTCA GGACCGTAAC GTGGTATTGG CCCTTAAAAA GGCCTTGGCC GATGCCCGCA GCCTCTACAA CCTGATCCGT CTGCAAGGTG AATACGCCTT CCTGCAGCAG CTTGATTTCC AAAAGCTGAA CCAGCTCTAC CGTGAAACCT GTAACCACCT TGACCTGCTG AACCTGAAAG AGAGTATTGA GAACAGCGCC GACACCACAA ATCTACTTAA CGTAGCCCTG GAAGAGATTC TGTTCATGTT CACCAAGGTA AAGGAAGAGG AGCTGGTACT GGCTGACCGG CTCAAGAACT GTCTGCGCCA GACCCGCGAG GCGCTGGCTG GCAACTTTGA TCAGCAGGAC CCGAAGTTCA TTAGCTTGAA GGAGGAGCTG GAGCGACTGT TCAAGAAGAA GAATCTAAGC GAAGTGACCC AGGAAGAGAT GAATGCCAAC ATCGGCGCAC TTAGCCAGAT CCATGAGCAG GTTAAGGAAC TGAACCGCCA GAACAACCAG CTGCGGGCCA AGTACCAAGG GGACGCCAAA TATACCCGCA TCCACAAACG ACTACTGGAA AGCAATATAC TCAGCGAAAC AGAACGCCGC ATCTTTGAGG CCCTGACCGG CGTCAAACAA GAGGCCGACG ACCAGGTACT GCAGAATACC CAACTGCTGA TCAATGAAAG CTATTTTGAA CGGATGATGA TGCCGCTGGT GATCAACCAG TTCCAAACCC AGCACAAGAT CAACCTTACC CCCGCTGCAT CCCGCAGCAT TAACCGTCTG GTGGTAAGCG AGTACCAGCA TGAATTTGTT TCAGGAACCA GAACAGGAGT AGCAGCTTGG TAA
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Protein sequence | MIFSEDSRVK IPCILHLVRL GYQYLSLKNA VWDEETNIFP ELFRRSIARI NPGTGNDEIQ RLLDDARLSL DNEDLGKAFY EKLTDRSGIR LIDFENFTNN SFHVVTELTY KNGDDEFRPD IILLINGMPL VFIEVKKPNN QEGVLAERNR IIKRCQNKKF RRFINITQLM VFSNNMEYDD GSSQPIEGAF YASPSYDEPI FNYFREEELL SLETLLAPEE DELENAVLKD NNLNVIKHSP EFLSNKSPDT PTNRICTSLF SRERLSFLLQ YAFAYLNESE GLHKHVMRYP QLFATKAIET KLDSGVRKGI IWHTQGSGKT ALAYYNVRFL TDYFQRRSII PKFYFIVDRI DLLIQAQREF TSRGLIVHTI STREDFRRDI KTIQVIHNHT GNPEITVVNI QKFEDDPGVV RVEDYDISIQ RVYFLDEVHR SYNPKGSFLA NLSQSDQNAI KIGLTGTPLL GDDYNSRALF GDYIHKYYYN ASIADGYTLR LIREEIATNY KLSLQEALAA VELQQGDLDK KLIFAHPRFV EPMLDYIITD FEKSRGALNA PGIGAMVICD SAEQARQMFE QFQSRFAPSE VIVQPPCTSD SYATDLPLAA DPAPTYAGQQ KQATRVKTAA LILHDVGNKN ERKQWMEDFK AGKIEILFVY NMLLTGFDAK RLKKLYLGRV IRKHNLLQAL TRVNRPYKEF RYGYVVDFAD IRKEFDATNR AYFEELQDEL GDELEHYSHL FKSPEEIEQE IEQIKDILFR FDTENAESFS RQISQIQDRN VVLALKKALA DARSLYNLIR LQGEYAFLQQ LDFQKLNQLY RETCNHLDLL NLKESIENSA DTTNLLNVAL EEILFMFTKV KEEELVLADR LKNCLRQTRE ALAGNFDQQD PKFISLKEEL ERLFKKKNLS EVTQEEMNAN IGALSQIHEQ VKELNRQNNQ LRAKYQGDAK YTRIHKRLLE SNILSETERR IFEALTGVKQ EADDQVLQNT QLLINESYFE RMMMPLVINQ FQTQHKINLT PAASRSINRL VVSEYQHEFV SGTRTGVAAW
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