Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0310 |
Symbol | |
ID | 6368729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 283025 |
End bp | 283987 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642675701 |
Product | type-F conjugative transfer system pilin assembly protein TrbC |
Protein accession | YP_001950558 |
Protein GI | 189423381 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTGTT TATTTATCGC TGCACCCTGG GCTGTATCTG CTGCCGGTAA TCCTGGATAT ATCACTACCC CCGATACCTG CTGCATCGTG GACAGGATCG TCGAGGATAC GGTTTATCTC AATAAAGTGG GCACGTGTAA CGGTAAACCC GGCAGAGCCT TCATCCAGAC AAAGCTTAAA AAGGTGAAGG TTGTTGTGAA TGGAACCGTG TGGAAGGAGA CAGACGTGGA AGGAATGAGT GTGCCGGATC TTGCCAATAC CCTGGCCAAA GCCGACCAAC TTGCAGAGCG ATTGGCAATT CCCAAAAGCC GCAATGACCG CGAAATGTCT GATTTGGCCG GAACGCTTGA TTCCTACTAC CACTCTGATG AATTTCAGTT GCGCGTATTG AGTGAGACAG AACGAATCAA GACAGAAGTC TTTGGGGATA AGGTCACCGG CTACTACGCA GATAAGGCCA AAAAAGAAAG CAAAGGAAAA CTCACCAACT CCGAGCGCAT CTATGTTTTC GTTTCCTCGG CCATGCCGCT CCAGACGATC AGGAACTATG CCGCTTCTGT GTCCCGCCTG GGAGACCCGA ACGTCACCCT GGTCATGCGC GGGTTCGTAG ATGGGATGAC GAAAATCCAG CCGACCATCA GCTTCATCGC CTCAGTACTG CAGCGTGACC AGTCGTGCCG CCCACAGGAA GGAGAATGCG AGATGATACC GACAAGCCTT GCAGTAGATC CCCTGTTGTT CCGGCGGTAC CAGATTGACC GGGTTCCAGC CGTGGTCTAT GCCCGGGGGC TCAAAGCTGA GGATGCCGGC TTGAGTGAGG GAGATGCCAA GAACGCCACT ATTGCGGATT ACCATACGGC ATACGGTGAT GCCCGCCTGG AATATCTACT TGATCAGATC CAGAGGGAAA CAGGATCGCA GTCTCTGGCC GCTTTGCTTT CCACTCCTGC AAACAAAAAC TGA
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Protein sequence | MSCLFIAAPW AVSAAGNPGY ITTPDTCCIV DRIVEDTVYL NKVGTCNGKP GRAFIQTKLK KVKVVVNGTV WKETDVEGMS VPDLANTLAK ADQLAERLAI PKSRNDREMS DLAGTLDSYY HSDEFQLRVL SETERIKTEV FGDKVTGYYA DKAKKESKGK LTNSERIYVF VSSAMPLQTI RNYAASVSRL GDPNVTLVMR GFVDGMTKIQ PTISFIASVL QRDQSCRPQE GECEMIPTSL AVDPLLFRRY QIDRVPAVVY ARGLKAEDAG LSEGDAKNAT IADYHTAYGD ARLEYLLDQI QRETGSQSLA ALLSTPANKN
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