| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3493 |
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| Symbol | |
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| ID | 6976945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3823976 |
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| End bp | 3824755 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643393013 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002277832 |
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| Protein GI | 209545603 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.234814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.110605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCT ACCGTACCCC GCGACGCGGG CCTTTGACGG CCGTACGGCT TCGCTTTCCC
GCAATCCTCG TCACGGCGTT TCTGGTGACG GCGTGTACGG GGGCGAGCAC CAGCGCCGTA
CCGGACAAGT CGAATGACGA CCTGAAATTC GCCGATGTCG AGCTGGAGAG CGGCGCGCCG
CAGGCCGCAC TCAGCATCAT GCAGAAGCGA CTGCAGACAC ATCCGCATGA GCCGGACACC
CTGGTCAGGC TCGGCCGGGC GAACGCGGCC CTGGGGCGGA CGGAGCCGGC TGTCCTCTTC
TTCCGCGAGG TCCTCGCCAC GGACCCGGAT TCGGTCGAGG CCGGCAAGGG GCTGGCAAGG
GTCCAGTTGG CCGCCGACCC ACGGGAAGCG CTGGCGACCC TGCGCAGCCT GGCGGCCCGG
CATCCCGAGG ACGCGCAGGT CCAGACCGAC CTGGGAGTCG CCTACGATCT GTGCCTGCAA
CATGCGCAGG CGCAGGCGGC GTACCGGCAG GCCATGCGGC TGAACCCGTT CGCAATCGCG
CCGCAGGTCA ATCTGGGCTT TTCGCTGGCC ATGAGCGGCA GGCCGAACGA AGCGGTGCAG
ATTCTCGGCC CGCTGGCCAC GTCCGCCGAC GGGACCGTGC GCATCCGCCA GGATTTTGCC
TTTGCCGAGG TCCAGGCCGG ACATGAAGAC ATCGCGCGTC GGATGCTGGC CCGGGACCTG
CCCAAGGACA GGATCGGTCC GATGCTGGAG GTCTTCCGTG ACTTCAACCG CATTCCGTAG
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| Protein sequence | MHPYRTPRRG PLTAVRLRFP AILVTAFLVT ACTGASTSAV PDKSNDDLKF ADVELESGAP
QAALSIMQKR LQTHPHEPDT LVRLGRANAA LGRTEPAVLF FREVLATDPD SVEAGKGLAR
VQLAADPREA LATLRSLAAR HPEDAQVQTD LGVAYDLCLQ HAQAQAAYRQ AMRLNPFAIA
PQVNLGFSLA MSGRPNEAVQ ILGPLATSAD GTVRIRQDFA FAEVQAGHED IARRMLARDL
PKDRIGPMLE VFRDFNRIP
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