Gene Gdia_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3340 
Symbol 
ID6976783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3652579 
End bp3654006 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content64% 
IMG OID643392854 
Productproton-translocating NADH-quinone oxidoreductase, chain N 
Protein accessionYP_002277682 
Protein GI209545453 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.402992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.871003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGA CACTTGCACT GCCGGAAATC GTCCTGGCGC TCTGTGGCCT CGCTATCCTC 
GTCTTCGGCG TGGTGCAGAA GAAGGAGCAG CCGTTCCTGT CCTGCTCCAT GCTGACGATC
GGCGCGTTCG TGCTGACCGG TTTCCTGGTC GTGATGTCGC CGGACGGGGT CGGATACAAC
CATATCTTCG TCAATGACGA TTTCGCCCGC TTCATGAAGA TCCTCAGCCT GGCGGGCGGG
GCATTCGCCA CCATGCTGAC GGTCGGCTAC GCGCGGAACA TGAAGGTGGA ACGGTTCGAA
TTTCCCGTCC TGCTGCTGTT CTCGACCCTG GGTGCGATGA TGATGGCGTC GTCCGAGAAC
CTGATGACGC TGTTCATCGG CCTGGAACTG TCGTCGCTTG CCATCTACAT CCTCTGCGCC
TTCGCACGGG ACGAGGTCAG GGGCGGCGAG GCCGGGCTGA AATATTTCGT CCTGGGCTCG
CTGGCCTCCG GCCTGCTGCT CTACGGCTCG TCCCTGGTCT ACGGCTATGC CGGCACGATG
GAATATGGCG GCATCCAGAT GGCGCTCAGC ACCAGTTCCA CCGCCGTGCC GATGGGCCTG
ATGTTCGGCA TCGTGTTCAT GCTGGCCGGG CTGACCTTCA AGCTGTCGGC GGTGCCGTTC
CATATGTGGA CACCGGACGT CTACCAGGGC GCGCCGACCT CGGTGACCGC GTACATGGCC
GGCGCGCCGA AATTCGCGGC CTTCGCGCTG CTGCTGCGGG TCATGGCCGG TCCCTTCGGC
CATGTCGCGC CGCAATGGCA GATCCTGGTC GAAGGCGTCT CGATGCTCTC GATGCTGTTC
GGTTCGCTGG CGGCCATTCC CCAGACCGAC ATCAAGCGGC TGATGGCCTA TTCCTCGATC
GGCCATATGG GCTACGCCCT GATGGGCCTG TGCGCCGGCA CGGCCGAGGG CATGCGCGGC
ACGCTGGTCT ATCTGACCAC GTACCTGCTG ATGAATGTCG GCGCCTTCGC CGTCATCATC
GCCATGCGCC GCAAGGGGCG TGAAGTGACC GGGATCGCCG ACCTGGCCGG GCTGGGCAAG
ACCGATCCGG GCCTGGCCAC CGCCATGGCG ATCTTCATGT TCAGCATGGC GGGTGCGCCG
CCGCTGGCCG GGTTTTTCGG CAAGATGATG GTGTTCTATG CCGCGATCAA CGCCCACCTG
TTCGGCCTGG CGGCCATCGG CGTCGTCAGC AGCGTGATCG GCGGCTACTA CTATGTCCGC
ATCGTCAAGG TGATGTTCTT TGACGACGCC GCGGCCCCCC TCGATCGCCG GCCGCTGTCG
CTGTCCTTCG TCTCGGTGGG CATGGGCATC GCCACCACCG GCTTCCTGCT GGTGCTGGGA
CCGGTATCCA GCGCGGCGCA GGCGGCGGCC CAGGCCCTGT TCAGGTGA
 
Protein sequence
MNWTLALPEI VLALCGLAIL VFGVVQKKEQ PFLSCSMLTI GAFVLTGFLV VMSPDGVGYN 
HIFVNDDFAR FMKILSLAGG AFATMLTVGY ARNMKVERFE FPVLLLFSTL GAMMMASSEN
LMTLFIGLEL SSLAIYILCA FARDEVRGGE AGLKYFVLGS LASGLLLYGS SLVYGYAGTM
EYGGIQMALS TSSTAVPMGL MFGIVFMLAG LTFKLSAVPF HMWTPDVYQG APTSVTAYMA
GAPKFAAFAL LLRVMAGPFG HVAPQWQILV EGVSMLSMLF GSLAAIPQTD IKRLMAYSSI
GHMGYALMGL CAGTAEGMRG TLVYLTTYLL MNVGAFAVII AMRRKGREVT GIADLAGLGK
TDPGLATAMA IFMFSMAGAP PLAGFFGKMM VFYAAINAHL FGLAAIGVVS SVIGGYYYVR
IVKVMFFDDA AAPLDRRPLS LSFVSVGMGI ATTGFLLVLG PVSSAAQAAA QALFR