| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3319 |
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| Symbol | |
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| ID | 6976759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 3627497 |
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| End bp | 3629164 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643392830 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002277661 |
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| Protein GI | 209545432 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.131298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCCA AGACGAATGC CTCCCCTTCG GCCGCGCAAG AAGCCGAAGC CCATCCCGTC
GCCCTCGTTC CGTCCGCCAC GGACGCAGAG TCGCCCGCCG ACGAATCGCC TGTTCCGGAT
GCCGGGGAGT CCGCCGCCCC GCAACCGCTC TTTTCCGACC TGGGGCTGTC CGACCCGATC
CAGCGCGCGA TCGACGACAT GGGATACCGC CATCCCACGC CGATCCAGGC GCAGGCCATT
CCTTATGTGC TGATGGGGCG CGACGTGCTG GGCGTGGCCC AGACCGGGAC AGGCAAGACC
GCGTCCTTCA CCCTGCCGAT GCTGGAAATC CTGTCCGGAT CACGGGCGCG GGCGCGCATG
CCGCGATCGC TGATCCTGGA GCCGACGCGC GAGCTGGCGC TGCAGGTGGC CGAGAATTTC
GTCAATTACG GCAAGTATCT GAAGCTGAAT CACGCGTTGC TGATCGGCGG CGAGAGCATG
GCCGAGCAAA AGGACGTGCT GAATCGCGGC GTCGACGTGC TGATCGCGAC TCCGGGCCGG
CTGATCGACC TGTTCGAGCG CGGCGGCCTG CTGCTGACGC AGACGCGCCT GCTGGTGATC
GACGAGGCCG ACCGCATGCT GGACATGGGG TTCATCCCGG ATATCGAGAA GATTGTCGCC
ATGCTGTCGC CCGTGCGGCA GACGCTGTTC TTCTCGGCCA CCATGGCGCC GGAGATCCGC
CGCCTGGCGG ACATGTTCCT GCAGAACCCC AAGGAAATCA CCGTCAGCCG CCCGTCCTCG
GTCGCCACCA CCATCGAGAC CGGGCTGGTC GTCGTCGACG AGGCCGACAA GCGGCGGGTG
CTGCGCCGCA TGCTGCGCGA CGACGCGGTG CAGAACGCCA TCGTGTTCTG CAACCGCAAG
CGCGATGTCG ATGTCCTGTA CAAATCGCTG GTGAAGCATG ATTTCTCGGC CGGGGCGCTG
CATGGCGACC TGCCGCAGTC GGTCCGTTTC GCGACCCTGG AGCGTTTCAA GTCCGGCGAA
CTGAAGATCC TGGTCTGTTC GGACGTGGCC GCGCGCGGCA TCGATATCGG CGGCCTGTCG
CATGTCTTCA ATTTCGACCT GCCGTTCCAT GCCGAGGATT ACGTCCACCG GATCGGCCGT
ACCGGCCGCG CCGGGCGATC CGGCCATGCC TACAGCCTGG CGACCCCGTA TGACCGCGCG
CTGGCCGAGG CCATCGAAAC GCTGATCGGC CATGCGATTC CCCGGCTGGA GGTCGAAGGC
GTGACCCAAT TGGAATGGTC CGAGGAATCG GGCACCCGTG GCGGGCGTGG CCGTGGTCGC
GGCAAGGGCA AGGCCCCGGA CCGGCGGGGC GGCAAGCCCG ACCGCGCCCG GAACGACGCC
ACGCCGGTCG AGGACAAGGC CGAACCCGTC GCGCCCCCCC AGCCCGTTTC CGCCCCCGTT
CCGCCCCCGT CCCCCGCGGC CGTCCCCGCC GAGGCGGCGT CGCCGCGCCG GTCCGGCCCG
AACCGCCAGC GGGACCGCGA TCGCGACCGG CATGCCGAGG ACGGGATATC CGGCCAGAAC
GGGACGGTCA TCGGGTTCGG CGACGACGTC CCCGCCTTCA TGACGCTGCC CCGGCGGGGC
CCCGCCATCG TGCCCGGTGT CGATGAGGTG ATCGACGAGA CGGCCTGA
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| Protein sequence | MSAKTNASPS AAQEAEAHPV ALVPSATDAE SPADESPVPD AGESAAPQPL FSDLGLSDPI
QRAIDDMGYR HPTPIQAQAI PYVLMGRDVL GVAQTGTGKT ASFTLPMLEI LSGSRARARM
PRSLILEPTR ELALQVAENF VNYGKYLKLN HALLIGGESM AEQKDVLNRG VDVLIATPGR
LIDLFERGGL LLTQTRLLVI DEADRMLDMG FIPDIEKIVA MLSPVRQTLF FSATMAPEIR
RLADMFLQNP KEITVSRPSS VATTIETGLV VVDEADKRRV LRRMLRDDAV QNAIVFCNRK
RDVDVLYKSL VKHDFSAGAL HGDLPQSVRF ATLERFKSGE LKILVCSDVA ARGIDIGGLS
HVFNFDLPFH AEDYVHRIGR TGRAGRSGHA YSLATPYDRA LAEAIETLIG HAIPRLEVEG
VTQLEWSEES GTRGGRGRGR GKGKAPDRRG GKPDRARNDA TPVEDKAEPV APPQPVSAPV
PPPSPAAVPA EAASPRRSGP NRQRDRDRDR HAEDGISGQN GTVIGFGDDV PAFMTLPRRG
PAIVPGVDEV IDETA
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