Gene Gdia_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_3308 
Symbol 
ID6976748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3618185 
End bp3618670 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content70% 
IMG OID643392819 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002277650 
Protein GI209545421 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02944] FeS assembly SUF system regulator, gammaproteobacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0515375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0430175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC TGTCGAAGCT GACCGACTAT GCCGTCGTGG CCCTGGTCCG TCTGGCGCAG 
GAGGACGAGG TGATGACCTC GCCCGCGCTG TCGCAGGCGA CGGGTATTCC CGAACCGACC
GTGGCCAAGG TGCTGAAGAT CCTGGCGGTC CATGACCTGG TGGTATCCCT GCGCGGCGCG
CGGGGGGGAT ACCGGCTGGC CCGTCCGTTG AACGATATTT CCGTGGCGCG GGTCATTACC
GCCGTGGACG GGCCGATTTC GCTGACGGCA TGCGTGGATG GCGGCGGGTG CGACACGCGC
CCGTTCTGCG GCGTGTGCGG GCAATGGGAT GCGGTCAACG ATGCGATCCG CGGGGCCCTG
TCCGCGATCA CGCTGGCCGA CATGCGCGCG CACGGCCAGG GTGTCCAGGG CCCATGCGTC
GAAGGGCAGG GGGGCCGTCA CGGGCTCCAG GATACATCCG GCGCCGGCCC GGCCGTCGCG
GTCTGA
 
Protein sequence
MLKLSKLTDY AVVALVRLAQ EDEVMTSPAL SQATGIPEPT VAKVLKILAV HDLVVSLRGA 
RGGYRLARPL NDISVARVIT AVDGPISLTA CVDGGGCDTR PFCGVCGQWD AVNDAIRGAL
SAITLADMRA HGQGVQGPCV EGQGGRHGLQ DTSGAGPAVA V