| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3294 |
|---|
| Symbol | |
|---|
| ID | 6976733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3600026 |
|---|
| End bp | 3600343 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643392804 |
|---|
| Product | integration host factor, alpha subunit |
|---|
| Protein accession | YP_002277636 |
|---|
| Protein GI | 209545407 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.13347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG TGACCCGCGC CAGTCTGGCA GAACATATCT ATAGTCAGGT CGGACTTTCC
AGGAACGAAT CCGCCGATCT GCTCGAACAT GTGCTCGAGC GGGTCGCGAA GGAACTCGAG
TCCGGAAATA CGGTCAAGAT CAGTGGCTTC GGGACCTTTT CGGTCCGTCA GAAGGGGCGC
CGGACGGGCC GGAACCCCAA GACGGGGGTC GAGGTGCCGA TCCTGCCGCG CTCGGTGCTG
GTCTTCCGGC CCAGCCAGTT GCTGCGTGCG CGGGTGAATG GCGGCCCGGT CGACGGGATC
GAGGATGACG GCGAATGA
|
|---|
| Protein sequence | MSTVTRASLA EHIYSQVGLS RNESADLLEH VLERVAKELE SGNTVKISGF GTFSVRQKGR
RTGRNPKTGV EVPILPRSVL VFRPSQLLRA RVNGGPVDGI EDDGE
|
|---|
| |