| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3016 |
|---|
| Symbol | |
|---|
| ID | 6976450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3302094 |
|---|
| End bp | 3303911 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643392524 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002277361 |
|---|
| Protein GI | 209545132 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.520064 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCG TCCCGCCTCG AACCCCGTCC CCTGCCGCCG CGTCGCTGGT GCCCCCCGGG
GGCGGCCCGC AGAATTCCGA GCGCAGTACC GTCCTGCTGC GCCGGCTGTG GCGGTCGGAA
GTGCGCCTGC ATCGCGGGCG CATCGCATCG GTGATCGGGC TGACCGTCGT GATGGCGTCG
CTGACCGGCC TGTACCCGCT GGTGATCCAG CGGGCGCTGG ACATGTTCGC CGCCCATGAT
CCGCGCATCC TCTACCAGGT GCCGGCGCTG GTGATCCTGA TCACCGCCGC CAAGGCGCTG
TCCCAGTACG GCCAGACCGT GGCGGTGCAG AACCTGGTCC TGATCGTGAT ACGCGGGCTG
CAGGCGCGCA TGTTCCGGCA TCTGCTGCAC ACCGATATCT CGCGCATCGA GCGCGAGGCC
CCGGCGCAGC TTTCGGCGCG CTTCACCACC GATGCCGTGT CGATCCGCGA GGCGATGATC
CGCGCGGTCA ATTCGATCGG CGACGTGGTC ACGGTCGCGG GCCTGGTCGT GTCCATGTTC
TACATGGATT GGGAACTCAG CCTGATCGCC GCCGTGCTGT ATCCGGTCGC GGCGGTGCCG
ATCCAGCGCC TGGGCAAGAA GGTCCGCCGT GCCTCGGGCG GCATGCAGGA ACGCATGGGC
GAGACCTCGG CCCTGCTGAC CGAAAGCTTC GCGCAGGCCC GCACGGTGCG CGTCTACCGG
CTGGAACAGA ACGAGGAGGC CCGCGTCAGC CACACGTTCG ACCAGTTGCA CATGGCCCTG
CAGCGCATCG CCCGGGGGCG GGCCCGCGTC GATCCGGTGC TGGAGGTGCT GGGTGGCTCG
GCGGTCGCCG CCGTGCTGGG GTTCGCCGGC TGGCGCGCCG CGCGGGGCGG CGCGACGCTG
GGCGATTTTT CCGGCTTCGT GGCGGCCCTG CTGCTGGCCG CGCGCCCGCT GCGGGCGCTG
GGATCGCTGA ACGCGGCGTT GCAGGAAGGG GCGGCCGGGC TGGAACGCAT CTTCGCCGTG
ATCGACGAGC CCGCCGACAT CGTCGAATCC CCCGATGCCC GTCCGCTGCC CGCCGGCAAC
GGCCATCTGC GCTTCGAGGA CGTGTCCTTC TTCTATCCGG ACGGACGGGC CGGGCTGGAC
GGGCTGAGCT TCGAGGCCCG GCCCGGGCTG ACCGTGGCGC TGGTCGGCCC GTCCGGGGCC
GGGAAATCCA CCGCCCTGTC GCTGATCCCC CGCCTGCATG ACGTCGGCGC CGGGCGCATC
GTGCTGGACG GGGTCGACCT GCGGGCGCTC CGGCTGGGCG ACCTGCGCGA CGCCATCGCC
TATGTCAGCC AGGACACGCT GCTGTTCGAC CTGTCGGTGG CCGACAACAT CCGCATCGGC
CGCCCGGGCG CCACGGATGC CGAAATCCGC ACGGCGGCGC GCGCCGCCGC GGCGGAGTCC
TTCATCGACG CGCTGCCCGA GGGCTTCGCC ACCCGGGTGG GGCCGGGCGG GCAGCGCCTG
TCGGGCGGCC AGCGCCAGCG CGTGGCCCTG GCCCGCGCGC TGCTGCGCGA CCCGCGCGTG
CTGCTGCTGG ACGAGGCCAC CAGCGCCCTG GACAGCGAGA GCGAGGCCCT GGTCCAGCAG
GCGCTGGGCC AGTTGCGCCA GGGGCGGACC ACCATCGTCG TGGCCCATCG GCTGTCGACC
GTACGCTCGG CCGACCTGGT GGTCGCGATG GCGGGCGGGC AGGGGGTCGA ATGCGGTACC
CACGCGGCCC TGATGGAAGC CGACGGGTTG TACGCCCGGA TGGTCCGGAC ACAGGCATTC
GGCGAAGTCG GCCCGTAA
|
|---|
| Protein sequence | MNVVPPRTPS PAAASLVPPG GGPQNSERST VLLRRLWRSE VRLHRGRIAS VIGLTVVMAS
LTGLYPLVIQ RALDMFAAHD PRILYQVPAL VILITAAKAL SQYGQTVAVQ NLVLIVIRGL
QARMFRHLLH TDISRIEREA PAQLSARFTT DAVSIREAMI RAVNSIGDVV TVAGLVVSMF
YMDWELSLIA AVLYPVAAVP IQRLGKKVRR ASGGMQERMG ETSALLTESF AQARTVRVYR
LEQNEEARVS HTFDQLHMAL QRIARGRARV DPVLEVLGGS AVAAVLGFAG WRAARGGATL
GDFSGFVAAL LLAARPLRAL GSLNAALQEG AAGLERIFAV IDEPADIVES PDARPLPAGN
GHLRFEDVSF FYPDGRAGLD GLSFEARPGL TVALVGPSGA GKSTALSLIP RLHDVGAGRI
VLDGVDLRAL RLGDLRDAIA YVSQDTLLFD LSVADNIRIG RPGATDAEIR TAARAAAAES
FIDALPEGFA TRVGPGGQRL SGGQRQRVAL ARALLRDPRV LLLDEATSAL DSESEALVQQ
ALGQLRQGRT TIVVAHRLST VRSADLVVAM AGGQGVECGT HAALMEADGL YARMVRTQAF
GEVGP
|
|---|
| |