Gene Gdia_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2980 
SymbolrpsH 
ID6976414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3259035 
End bp3259433 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content65% 
IMG OID643392488 
Product30S ribosomal protein S8 
Protein accessionYP_002277325 
Protein GI209545096 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTT CTGATCCGTT GGGTGATATG CTCACCCGGA TCCGCAACGC GCAGCGTGCG 
CGTCATGCGG CCTGTGTCGC GCCGGCGTCG AAGCTGCGCG CGAATGTGCT CGAGGCCCTG
CGCCGCGAAG GCTATATCCG CGGCTATGCG CAGGAAGACC TGCGCAAGGG CGTGGCCCAG
CTTCGTATCG AGCTGAAATA TCTGGATGGC GAGCCGGTCA TCAAGGAGAT CCACCGGGTG
TCGAAGCCCG GGCGCCGGGT CTACTCGAAG ATCAAGGAAC TGCCGCGGGT CTATGCCGGT
CTCGGCGTGT CGATCCTGTC CACGCCCCGT GGCGTCCTGT CCGATGCGGA AGCCCGCGCT
GCCAATGTTG GCGGCGAGGT CCTCTGCCGC GTGTTCTGA
 
Protein sequence
MSLSDPLGDM LTRIRNAQRA RHAACVAPAS KLRANVLEAL RREGYIRGYA QEDLRKGVAQ 
LRIELKYLDG EPVIKEIHRV SKPGRRVYSK IKELPRVYAG LGVSILSTPR GVLSDAEARA
ANVGGEVLCR VF